RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 CHD2O14647 1828 aaKnown RBP4.35□□□□□ -1.71
GPNMB-212ENST00000487890 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.35□□□□□ -1.71
GPNMB-212ENST00000487890 F8W735 103 aaPredicted RBP4.35□□□□□ -1.71
GPNMB-212ENST00000487890 FAM229AH3BQW9 127 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 MEIS1O00470 390 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 AQP7O14520 342 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 MSCO60682 206 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 CAND2O75155 1236 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 GLRX3O76003 335 aaKnown RBP4.35□□□□□ -1.71
GPNMB-212ENST00000487890 PRKD3O94806 890 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 ALX3O95076 343 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 NFICP08651 508 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 RAB6AP20340 208 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 ETV3P41162 512 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 ADCYAP1R1P41586 468 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 PREPP48147 710 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 BIRC2Q13490 618 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 UBE4AQ14139 1066 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 SYDE2Q5VT97 1194 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 ANKRD34AQ69YU3 496 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 CCSAPQ6IQ19 270 aaPredicted RBP4.35□□□□□ -1.71
GPNMB-212ENST00000487890 ZBTB46Q86UZ6 589 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 SMC5Q8IY18 1101 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 WHAMMQ8TF30 809 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 FRS2Q8WU20 508 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 SLC39A13Q96H72 371 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 RPS6KC1Q96S38 1066 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 SPOCK3Q9BQ16 436 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 ORAI3Q9BRQ5 295 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 DSCC1Q9BVC3 393 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 MRPL18Q9H0U6 180 aaKnown RBP4.35□□□□□ -1.71
GPNMB-212ENST00000487890 SEMA6CQ9H3T2 930 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 ARNT2Q9HBZ2 717 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 GPRC5CQ9NQ84 441 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 PRDM10Q9NQV6 1147 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 TMEFF2Q9UIK5 374 aaPredicted RBP4.35□□□□□ -1.71
GPNMB-212ENST00000487890 ROCK1Q13464 1354 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 NOS1P29475 1434 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 MED1Q15648 1581 aaPredicted RBP4.35□□□□□ -1.71
GPNMB-212ENST00000487890 TMEM131LA2VDJ0 1609 aa4.35□□□□□ -1.71
GPNMB-212ENST00000487890 WDR64B1ANS9 1081 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 B4E1Z4 1266 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 CBX4O00257 560 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 TRAF5O00463 557 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 TERTO14746 1132 aaKnown RBP4.34□□□□□ -1.71
GPNMB-212ENST00000487890 FBXO21O94952 628 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 PRAMEF1O95521 474 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 EOMESO95936 686 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 F2P00734 622 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 CKMP06732 381 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 THBDP07204 575 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 ZSCAN20P17040 1043 aaPredicted RBP4.34□□□□□ -1.71
GPNMB-212ENST00000487890 ITIH2P19823 946 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 USP11P51784 963 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 DSG1Q02413 1049 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 MLC1Q15049 377 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 FAM102BQ5T8I3 360 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 SHISA2Q6UWI4 295 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 Q6ZNB5 142 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 KIF18BQ86Y91 864 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 CBARPQ8N350 705 aaPredicted RBP4.34□□□□□ -1.71
GPNMB-212ENST00000487890 IGSF22Q8N9C0 903 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 SMC1BQ8NDV3 1235 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 NPLOC4Q8TAT6 608 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 ZNF526Q8TF50 670 aaPredicted RBP4.34□□□□□ -1.71
GPNMB-212ENST00000487890 FBLIM1Q8WUP2 373 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 COPS5Q92905 334 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 Q96M66 194 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 PHF20Q9BVI0 1012 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 PLVAPQ9BX97 442 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 RRAGCQ9HB90 399 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 VTA1Q9NP79 307 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 CHST12Q9NRB3 414 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 CHST7Q9NS84 486 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 PRR13Q9NZ81 148 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 ZNF180Q9UJW8 692 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 APOBEC2Q9Y235 224 aaKnown RBP4.34□□□□□ -1.71
GPNMB-212ENST00000487890 SF3B6Q9Y3B4 125 aaKnown RBP4.34□□□□□ -1.71
GPNMB-212ENST00000487890 TMEM94Q12767 1356 aa4.34□□□□□ -1.71
GPNMB-212ENST00000487890 PHLPP1O60346 1717 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 ROBO1Q9Y6N7 1651 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 MSH6P52701 1360 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 C2orf71A6NGG8 1288 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 STXBP3O00186 592 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 ARVCFO00192 962 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 SIGLEC6O43699 453 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 ABLIM3O94929 683 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 FKBP9O95302 570 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 KRT18P05783 430 aaKnown RBP4.33□□□□□ -1.72
GPNMB-212ENST00000487890 SRGAP2CP0DJJ0 459 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 CTSKP43235 329 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 IL2P60568 153 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 GPR85P60893 370 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 TRIM28Q13263 835 aaKnown RBP4.33□□□□□ -1.72
GPNMB-212ENST00000487890 CDK5R2Q13319 367 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 ABCB5Q2M3G0 1257 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 SEZ6L2Q6UXD5 910 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 LINC00114Q6XXX2 140 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 FKBP9P1Q75LS8 142 aa4.33□□□□□ -1.72
GPNMB-212ENST00000487890 DDX53Q86TM3 631 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms