RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 FCHSD1Q86WN1 690 aa14.39□□□□□ -0.11
ITSN1-229ENST00000487427 RASEFQ8IZ41 740 aa14.39□□□□□ -0.11
ITSN1-229ENST00000487427 TMEM199Q8N511 208 aa14.39□□□□□ -0.11
ITSN1-229ENST00000487427 SRBD1Q8N5C6 995 aaKnown RBP14.39□□□□□ -0.11
ITSN1-229ENST00000487427 DEFB123Q8N688 67 aa14.39□□□□□ -0.11
ITSN1-229ENST00000487427 LRRC2Q9BYS8 371 aa14.39□□□□□ -0.11
ITSN1-229ENST00000487427 TRPV6Q9H1D0 765 aa14.39□□□□□ -0.11
ITSN1-229ENST00000487427 ALDH8A1Q9H2A2 487 aaPredicted RBP14.39□□□□□ -0.11
ITSN1-229ENST00000487427 SEC63Q9UGP8 760 aaKnown RBP14.39□□□□□ -0.11
ITSN1-229ENST00000487427 DDX41Q9UJV9 622 aaKnown RBP14.39□□□□□ -0.11
ITSN1-229ENST00000487427 LCTP09848 1927 aa14.39□□□□□ -0.11
ITSN1-229ENST00000487427 B4GALT4O60513 344 aa14.38□□□□□ -0.11
ITSN1-229ENST00000487427 PLEKHA8P1O95397 391 aa14.38□□□□□ -0.11
ITSN1-229ENST00000487427 HMGB1P09429 215 aaKnown RBP14.38□□□□□ -0.11
ITSN1-229ENST00000487427 SUPT20HL2P0C7V6 817 aa14.38□□□□□ -0.11
ITSN1-229ENST00000487427 MYCLP12524 364 aaPredicted RBP14.38□□□□□ -0.11
ITSN1-229ENST00000487427 ARHGAP1Q07960 439 aa14.38□□□□□ -0.11
ITSN1-229ENST00000487427 PPIGQ13427 754 aaKnown RBP eCLIP14.38□□□□□ -0.111e-6■■■■□ 25.5
ITSN1-229ENST00000487427 PGM5Q15124 567 aa14.38□□□□□ -0.11
ITSN1-229ENST00000487427 FAM109BQ6ICB4 259 aaPredicted RBP14.38□□□□□ -0.11
ITSN1-229ENST00000487427 AFG1LQ8WV93 481 aa14.38□□□□□ -0.11
ITSN1-229ENST00000487427 HIPK3Q9H422 1215 aa14.38□□□□□ -0.11
ITSN1-229ENST00000487427 MRVI1Q9Y6F6 885 aa14.38□□□□□ -0.11
ITSN1-229ENST00000487427 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 TGFB3P10600 412 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 RXRAP19793 462 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 CCND2P30279 289 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 CYP2C18P33260 490 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 LAMC2Q13753 1193 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 NBPF20Q3BBV1 942 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 ADCK5Q3MIX3 580 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 NFRKBQ6P4R8 1299 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 CMTR1Q8N1G2 835 aaKnown RBP14.37□□□□□ -0.11
ITSN1-229ENST00000487427 KCNB2Q92953 911 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 CUL5Q93034 780 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 EMID1Q96A84 441 aaPredicted RBP14.37□□□□□ -0.11
ITSN1-229ENST00000487427 RNPC3Q96LT9 517 aaKnown RBP14.37□□□□□ -0.11
ITSN1-229ENST00000487427 PPP1R12CQ9BZL4 782 aa14.37□□□□□ -0.11
ITSN1-229ENST00000487427 LRRC37A2A6NM11 1700 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 LAMA3Q16787 3333 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 PIK3CDO00329 1044 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 RGS20O76081 388 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 CSF2RAP15509 400 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 CASTP20810 708 aaKnown RBP14.36□□□□□ -0.11
ITSN1-229ENST00000487427 SMAD3P84022 425 aaKnown RBP14.36□□□□□ -0.11
ITSN1-229ENST00000487427 PTPN11Q06124 597 aaPredicted RBP14.36□□□□□ -0.11
ITSN1-229ENST00000487427 DGKDQ16760 1214 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 APOA5Q6Q788 366 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 TMTC3Q6ZXV5 915 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 Q7L0L9 218 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 C16orf59Q7L2K0 433 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 MICU3Q86XE3 530 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 DHX37Q8IY37 1157 aaKnown RBP14.36□□□□□ -0.11
ITSN1-229ENST00000487427 IL31RAQ8NI17 732 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 SMARCC2Q8TAQ2 1214 aa14.36□□□□□ -0.11
ITSN1-229ENST00000487427 NOC4LQ9BVI4 516 aaKnown RBP14.36□□□□□ -0.11
ITSN1-229ENST00000487427 MEIS2O14770 477 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 STAM2O75886 525 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 REC8O95072 547 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 MMP3P08254 477 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 HSPA4P34932 840 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 TMEM240Q5SV17 173 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 USP17L6PQ6QN14 398 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 RAB11FIP4Q86YS3 637 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 CCDC82Q8N4S0 544 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 PPTC7Q8NI37 304 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 TRMT13Q9NUP7 481 aaKnown RBP14.35□□□□□ -0.11
ITSN1-229ENST00000487427 RBM28Q9NW13 759 aaKnown RBP14.35□□□□□ -0.11
ITSN1-229ENST00000487427 MTMR10Q9NXD2 777 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 BRPF3Q9ULD4 1205 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 SZT2Q5T011 3432 aa14.35□□□□□ -0.11
ITSN1-229ENST00000487427 BAZ2BQ9UIF8 2168 aaKnown RBP14.34□□□□□ -0.11
ITSN1-229ENST00000487427 LTBP2Q14767 1821 aa14.34□□□□□ -0.11
ITSN1-229ENST00000487427 ZBTB43O43298 467 aa14.34□□□□□ -0.11
ITSN1-229ENST00000487427 PPFIA4O75335 1185 aa14.34□□□□□ -0.11
ITSN1-229ENST00000487427 GNPTABQ3T906 1256 aa14.34□□□□□ -0.11
ITSN1-229ENST00000487427 FAM47CQ5HY64 1035 aa14.34□□□□□ -0.11
ITSN1-229ENST00000487427 CELF3Q5SZQ8 465 aaKnown RBP14.34□□□□□ -0.11
ITSN1-229ENST00000487427 MYSM1Q5VVJ2 828 aa14.34□□□□□ -0.11
ITSN1-229ENST00000487427 XRRA1Q6P2D8 792 aa14.34□□□□□ -0.11
ITSN1-229ENST00000487427 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.34□□□□□ -0.114e-6■□□□□ 8
ITSN1-229ENST00000487427 IL23AQ9NPF7 189 aa14.34□□□□□ -0.11
ITSN1-229ENST00000487427 FRMPD4Q14CM0 1322 aa14.34□□□□□ -0.11
ITSN1-229ENST00000487427 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.33□□□□□ -0.12
ITSN1-229ENST00000487427 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.33□□□□□ -0.12
ITSN1-229ENST00000487427 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 SPATA31C2B4DYI2 1134 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 CYP2C9P11712 490 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 HOXD8P13378 290 aaPredicted RBP14.33□□□□□ -0.12
ITSN1-229ENST00000487427 ICAM3P32942 547 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 RCAN1P53805 252 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 CCL23P55773 120 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 CHMP4BP1P59074 171 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 MRPS9P82933 396 aaKnown RBP14.33□□□□□ -0.12
ITSN1-229ENST00000487427 FGD1P98174 961 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 SP2Q02086 613 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 RTN1Q16799 776 aa14.33□□□□□ -0.12
ITSN1-229ENST00000487427 ERICH6BQ5W0A0 696 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms