RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 C11orf84Q9BUA3 381 aaPredicted RBP14.02□□□□□ -0.17
TRIM56-204ENST00000487252 IGFLR1Q9H665 355 aa14.02□□□□□ -0.17
TRIM56-204ENST00000487252 INCENPQ9NQS7 918 aa14.02□□□□□ -0.17
TRIM56-204ENST00000487252 CTDP1Q9Y5B0 961 aaPredicted RBP14.02□□□□□ -0.17
TRIM56-204ENST00000487252 RAD50Q92878 1312 aa14.01□□□□□ -0.17
TRIM56-204ENST00000487252 PNMA6EA0A0J9YXQ4 647 aa14.01□□□□□ -0.17
TRIM56-204ENST00000487252 MMP1P03956 469 aa14.01□□□□□ -0.17
TRIM56-204ENST00000487252 ALDH1L2Q3SY69 923 aa14.01□□□□□ -0.17
TRIM56-204ENST00000487252 ASTLQ6HA08 431 aaPredicted RBP14.01□□□□□ -0.17
TRIM56-204ENST00000487252 LCORLQ8N3X6 602 aa14.01□□□□□ -0.17
TRIM56-204ENST00000487252 DBF4BQ8NFT6 615 aa14.01□□□□□ -0.17
TRIM56-204ENST00000487252 RPGRIP1Q96KN7 1286 aa14.01□□□□□ -0.17
TRIM56-204ENST00000487252 GTF2IRD1Q9UHL9 959 aa14.01□□□□□ -0.17
TRIM56-204ENST00000487252 FASNP49327 2511 aaKnown RBP14.01□□□□□ -0.17
TRIM56-204ENST00000487252 MYH4Q9Y623 1939 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 EMSYQ7Z589 1322 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 TCRBV5S4A2TA0A5A2 114 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 GLP2RO95838 553 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 GNAI3P08754 354 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 BMPR1AP36894 532 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 PLEKHG4Q58EX7 1191 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 ZNF618Q5T7W0 954 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 RPAP2Q8IXW5 612 aaPredicted RBP14□□□□□ -0.17
TRIM56-204ENST00000487252 KIAA2013Q8IYS2 634 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 KAT2BQ92831 832 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 CLP1Q92989 425 aaKnown RBP14□□□□□ -0.17
TRIM56-204ENST00000487252 WNT8BQ93098 351 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 TRERF1Q96PN7 1200 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 PURBQ96QR8 312 aaKnown RBP14□□□□□ -0.17
TRIM56-204ENST00000487252 SEMA4AQ9H3S1 761 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 ATP8A2Q9NTI2 1148 aa14□□□□□ -0.17
TRIM56-204ENST00000487252 TLR7Q9NYK1 1049 aaKnown RBP14□□□□□ -0.17
TRIM56-204ENST00000487252 CYP2D7A0A087X1C5 515 aa13.99□□□□□ -0.17
TRIM56-204ENST00000487252 PDE6AP16499 860 aa13.99□□□□□ -0.17
TRIM56-204ENST00000487252 CTNNB1P35222 781 aa13.99□□□□□ -0.17
TRIM56-204ENST00000487252 PTK7Q13308 1070 aa13.99□□□□□ -0.17
TRIM56-204ENST00000487252 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
TRIM56-204ENST00000487252 MKL1Q969V6 931 aa13.99□□□□□ -0.17
TRIM56-204ENST00000487252 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.98□□□□□ -0.17
TRIM56-204ENST00000487252 ALDH5A1P51649 535 aaPredicted RBP13.98□□□□□ -0.17
TRIM56-204ENST00000487252 CLCN5P51795 746 aa13.98□□□□□ -0.17
TRIM56-204ENST00000487252 MUM1L1Q5H9M0 696 aa13.98□□□□□ -0.17
TRIM56-204ENST00000487252 UBALD2Q8IYN6 164 aa13.98□□□□□ -0.17
TRIM56-204ENST00000487252 RC3H2Q9HBD1 1191 aaKnown RBP13.98□□□□□ -0.17
TRIM56-204ENST00000487252 SYNPO2Q9UMS6 1093 aa13.98□□□□□ -0.17
TRIM56-204ENST00000487252 RWDD3Q9Y3V2 267 aa13.98□□□□□ -0.17
TRIM56-204ENST00000487252 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
TRIM56-204ENST00000487252 MYO10Q9HD67 2058 aa13.97□□□□□ -0.17
TRIM56-204ENST00000487252 IGKV6D-41A0A0C4DH26 115 aa13.97□□□□□ -0.17
TRIM56-204ENST00000487252 PRKAB2O43741 272 aa13.97□□□□□ -0.17
TRIM56-204ENST00000487252 LMNAP02545 664 aaKnown RBP13.97□□□□□ -0.17
TRIM56-204ENST00000487252 PPP2R5BQ15173 497 aa13.97□□□□□ -0.17
TRIM56-204ENST00000487252 SLC9C2Q5TAH2 1124 aa13.97□□□□□ -0.17
TRIM56-204ENST00000487252 ADGRD2Q7Z7M1 963 aa13.97□□□□□ -0.17
TRIM56-204ENST00000487252 COPS5Q92905 334 aa13.97□□□□□ -0.17
TRIM56-204ENST00000487252 ADD3Q9UEY8 706 aaKnown RBP13.97□□□□□ -0.17
TRIM56-204ENST00000487252 ZBED9Q6R2W3 1325 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 ZNF532Q9HCE3 1301 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 BRD1O95696 1058 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 FIBCD1Q8N539 461 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 KREMEN2Q8NCW0 462 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 GMCL1P1Q8NEA9 526 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 SCFD2Q8WU76 684 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 PPP2R3CQ969Q6 453 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 EAF2Q96CJ1 260 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-204ENST00000487252 IL17RAQ96F46 866 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 PLVAPQ9BX97 442 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 HDAC6Q9UBN7 1215 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 BARX2Q9UMQ3 279 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-204ENST00000487252 PLAGL2Q9UPG8 496 aa13.96□□□□□ -0.17
TRIM56-204ENST00000487252 UPP2O95045 317 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 ALAS1P13196 640 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 RASA1P20936 1047 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 EDNRBP24530 442 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 DNAJB1P25685 340 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 MTMR3Q13615 1198 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 POLA2Q14181 598 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 ACAP1Q15027 740 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 ATP8B4Q8TF62 1192 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 P2RX5Q93086 422 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 IFIH1Q9BYX4 1025 aaKnown RBP13.95□□□□□ -0.18
TRIM56-204ENST00000487252 API5Q9BZZ5 524 aaKnown RBP13.95□□□□□ -0.18
TRIM56-204ENST00000487252 ARMT1Q9H993 441 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 CLIP2Q9UDT6 1046 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 NOB1Q9ULX3 412 aaKnown RBP13.95□□□□□ -0.18
TRIM56-204ENST00000487252 SORCS3Q9UPU3 1222 aa13.95□□□□□ -0.18
TRIM56-204ENST00000487252 PLA2G6O60733 806 aa13.94□□□□□ -0.18
TRIM56-204ENST00000487252 MMP3P08254 477 aa13.94□□□□□ -0.18
TRIM56-204ENST00000487252 BMP3P12645 472 aa13.94□□□□□ -0.18
TRIM56-204ENST00000487252 CHMP4BP1P59074 171 aa13.94□□□□□ -0.18
TRIM56-204ENST00000487252 ANGPT1Q15389 498 aa13.94□□□□□ -0.18
TRIM56-204ENST00000487252 CCDC8Q9H0W5 538 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-204ENST00000487252 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
TRIM56-204ENST00000487252 SMC4Q9NTJ3 1288 aa13.94□□□□□ -0.18
TRIM56-204ENST00000487252 RALYQ9UKM9 306 aaKnown RBP13.94□□□□□ -0.18
TRIM56-204ENST00000487252 ASPMQ8IZT6 3477 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 RSPH10B2B2RC85 870 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 HAS3O00219 553 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 ARIH2O95376 493 aa13.93□□□□□ -0.18
TRIM56-204ENST00000487252 RSPH10BP0C881 870 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms