RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ITGA4P13612 1032 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 EEF1DP3Q658K8 133 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 BORAQ6PGQ7 559 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 UNC5AQ6ZN44 842 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 PALM2Q8IXS6 379 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 TAB3Q8N5C8 712 aaPredicted RBP5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 KYQ8NBH2 561 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 ADCY4Q8NFM4 1077 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 EFR3BQ9Y2G0 817 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 HS3ST3A1Q9Y663 406 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 SOX9P48436 509 aa5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 NASPP49321 788 aaPredicted RBP5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 ITGA1P56199 1179 aa5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 DPY19L1Q2PZI1 675 aa5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 ZNF585AQ6P3V2 769 aa5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 MCF2L2Q86YR7 1114 aa5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 ARMC5Q96C12 935 aa5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 WWC2-AS2Q96NR7 200 aa5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 GINM1Q9NU53 330 aa5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 DIS3Q9Y2L1 958 aaKnown RBP5.49□□□□□ -1.53
SNRNP27-204ENST00000487029 A0A087WZG4 1122 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 C7orf72A4D263 438 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 LAMTOR5O43504 91 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 FUCA1P04066 466 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 CD300LDQ6UXZ3 194 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 FAM124AQ86V42 546 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 DNERQ8NFT8 737 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 PLEKHO2Q8TD55 490 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 USP33Q8TEY7 942 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 PTPN18Q99952 460 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 ZNF214Q9UL59 606 aaPredicted RBP5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 STRIP2Q9ULQ0 834 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 LTBP3Q9NS15 1303 aa5.48□□□□□ -1.53
SNRNP27-204ENST00000487029 C2orf71A6NGG8 1288 aa5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 SGSM2O43147 1006 aa5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 SSBP05455 408 aaKnown RBP eCLIP5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 GTF2F1P35269 517 aaKnown RBP eCLIP5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 R3HDM1Q15032 1099 aaKnown RBP5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 MBLAC2Q68D91 279 aa5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 ETV3LQ6ZN32 361 aa5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 DPF3Q92784 378 aa5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 MBD6Q96DN6 1003 aa5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 LCORQ96JN0 433 aaPredicted RBP5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 TM9SF2Q99805 663 aa5.47□□□□□ -1.53
SNRNP27-204ENST00000487029 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.47□□□□□ -1.533e-9■■■□□ 17.4
SNRNP27-204ENST00000487029 MIB1Q86YT6 1006 aa5.46□□□□□ -1.54
SNRNP27-204ENST00000487029 TTLL6Q8N841 843 aa5.46□□□□□ -1.54
SNRNP27-204ENST00000487029 NPEPPSL1A6NEC2 478 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 STK10O94804 968 aaKnown RBP5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 TGM1P22735 817 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 GUCY2CP25092 1073 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 SEPHS1P49903 392 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 ADAM9Q13443 819 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 TCEAL1Q15170 157 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 SPDYAQ5MJ70 313 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 IGDCC4Q8TDY8 1250 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 CPLX3Q8WVH0 158 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 FERD3LQ96RJ6 166 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 HAUS7Q99871 368 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 KLHL25Q9H0H3 589 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 WHRNQ9P202 907 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 BACE2Q9Y5Z0 518 aa5.45□□□□□ -1.54
SNRNP27-204ENST00000487029 NPHP3-ACAD11A0A0J9YXS1 232 aa5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 ZNF28P17035 718 aa5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 PAMP19021 973 aa5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 STAT5AP42229 794 aa5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 RBL2Q08999 1139 aa5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 USP51Q70EK9 711 aa5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 FGD4Q96M96 766 aa5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 CDK5RAP1Q96SZ6 601 aaKnown RBP5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 DNAJC2Q99543 621 aaKnown RBP5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 HIRIP3Q9BW71 556 aaPredicted RBP5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 PPT2Q9UMR5 302 aa5.44□□□□□ -1.54
SNRNP27-204ENST00000487029 PATE3B3GLJ2 98 aa5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 IMPDH2P12268 514 aa5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 CR1LQ2VPA4 569 aa5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 CCDC81Q6ZN84 652 aa5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 CIR1Q86X95 450 aaPredicted RBP5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 RBBP8NLQ8NC74 664 aaPredicted RBP5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 DEF6Q9H4E7 631 aa5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 ZNF408Q9H9D4 720 aa5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 PCDH18Q9HCL0 1135 aa5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 MARCH2Q9P0N8 246 aa5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 CGGBP1Q9UFW8 167 aaPredicted RBP5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 PCDHB10Q9UN67 800 aa5.43□□□□□ -1.54
SNRNP27-204ENST00000487029 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 NPHS1O60500 1241 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 ETFBP38117 255 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 MLLT6P55198 1093 aaPredicted RBP5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 EIF6P56537 245 aaKnown RBP5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 SURF1Q15526 300 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 SOGA3Q5TF21 947 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 PRAMEF18Q5VWM3 479 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 FBXW10Q5XX13 1052 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 DCP2Q8IU60 420 aaKnown RBP5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 CKAP2LQ8IYA6 745 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 OR6P1Q8NGX9 317 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 ANAPC16Q96DE5 110 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 SHDQ96IW2 340 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms