RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DDX12PQ92771 950 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 IQCDQ96DY2 449 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 HAUS4Q9H6D7 363 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 KCNQ5Q9NR82 932 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 NYAP2Q9P242 653 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 ABCB11O95342 1321 aa20.03■□□□□ 0.8
PDLIM7-207ENST00000486828 FGFR1OPO95684 399 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-207ENST00000486828 KLK7P49862 253 aa20.03■□□□□ 0.8
PDLIM7-207ENST00000486828 ZNF662Q6ZS27 426 aa20.03■□□□□ 0.8
PDLIM7-207ENST00000486828 IDI2Q9BXS1 227 aa20.03■□□□□ 0.8
PDLIM7-207ENST00000486828 PARD6BQ9BYG5 372 aa20.03■□□□□ 0.8
PDLIM7-207ENST00000486828 ZNHIT6Q9NWK9 470 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-207ENST00000486828 MYH7BA7E2Y1 1941 aa20.03■□□□□ 0.8
PDLIM7-207ENST00000486828 EEF2P13639 858 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 HERVK_113P62684 666 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 TUBB4BP68371 445 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 KRT83P78385 493 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 HDLBPQ00341 1268 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 LRRC63Q05C16 580 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 ECM1Q16610 540 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 QRICH1Q2TAL8 776 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 HYIQ5T013 277 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 STRIP1Q5VSL9 837 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 KIAA0825Q8IV33 1275 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 PCMTD1Q96MG8 357 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 KANSL2Q9H9L4 492 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 PI4KBQ9UBF8 816 aa20.02■□□□□ 0.8
PDLIM7-207ENST00000486828 DDTLA6NHG4 134 aaPredicted RBP20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 MARCH6O60337 910 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 IDEP14735 1019 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 CYLC1P35663 651 aaPredicted RBP20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 SLC1A4P43007 532 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 CACNB3P54284 484 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 TCP10Q12799 353 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 SEPT2Q15019 361 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 WHAMMP3Q1A5X7 153 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 CERKLQ49MI3 558 aaPredicted RBP20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 CC2D1AQ6P1N0 951 aaPredicted RBP20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 FOXR2Q6PJQ5 311 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 CCDC170Q8IYT3 715 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 ZNF622Q969S3 477 aaKnown RBP eCLIP20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 FAM198AQ9UFP1 575 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 PUF60Q9UHX1 559 aaKnown RBP20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 PCDHA12Q9UN75 941 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 PCDHAC2Q9Y5I4 1007 aa20.02■□□□□ 0.79
PDLIM7-207ENST00000486828 KDM3AQ9Y4C1 1321 aa20.01■□□□□ 0.79
PDLIM7-207ENST00000486828 VWA3BQ502W6 1294 aa20.01■□□□□ 0.79
PDLIM7-207ENST00000486828 SLFN13Q68D06 897 aa20.01■□□□□ 0.79
PDLIM7-207ENST00000486828 ZSWIM4Q9H7M6 989 aa20.01■□□□□ 0.79
PDLIM7-207ENST00000486828 TRIM10Q9UDY6 481 aa20.01■□□□□ 0.79
PDLIM7-207ENST00000486828 GUCA1BQ9UMX6 200 aa20.01■□□□□ 0.79
PDLIM7-207ENST00000486828 ARFGEF1Q9Y6D6 1849 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 FAM196BA6NMK8 535 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 NKRFO15226 690 aaKnown RBP eCLIP20■□□□□ 0.79
PDLIM7-207ENST00000486828 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
PDLIM7-207ENST00000486828 SEC31AO94979 1220 aaKnown RBP20■□□□□ 0.79
PDLIM7-207ENST00000486828 CDK17Q00537 523 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 AMPD2Q01433 879 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 CDC37Q16543 378 aaPredicted RBP20■□□□□ 0.79
PDLIM7-207ENST00000486828 DACT2Q5SW24 774 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 TATDN1Q6P1N9 297 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 NT5C3AQ9H0P0 336 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 PCDHA1Q9Y5I3 950 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 GOLGB1Q14789 3259 aaKnown RBP20■□□□□ 0.79
PDLIM7-207ENST00000486828 EIF3CLB5ME19 914 aaKnown RBP20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L15C9J2P7 530 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L13C9JLJ4 530 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L11C9JVI0 530 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L18D6R9N7 530 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L22D6RA61 530 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L17D6RBQ6 530 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L19D6RCP7 530 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L20D6RJB6 530 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 PSMD14O00487 310 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 SLC26A4O43511 780 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP11P51784 963 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 RBM5P52756 815 aaKnown RBP eCLIP20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L24Q0WX57 530 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 MAN2A1Q16706 1144 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 USP17L6PQ6QN14 398 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 SH3BP5LQ7L8J4 393 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 GJA10Q969M2 543 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 DNAJC19Q96DA6 116 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 EIF3CQ99613 913 aaKnown RBP20■□□□□ 0.79
PDLIM7-207ENST00000486828 NDST4Q9H3R1 872 aa20■□□□□ 0.79
PDLIM7-207ENST00000486828 NHEJ1Q9H9Q4 299 aaPredicted RBP20■□□□□ 0.79
PDLIM7-207ENST00000486828 ZNF646O15015 1829 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 POTEB2H3BUK9 544 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 RAD21O60216 631 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 ECE2O60344 883 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 POLD1P28340 1107 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 PLA2G4AP47712 749 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 SHROOM1Q2M3G4 852 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 LRRC55Q6ZSA7 311 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 TSG101Q99816 390 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 TRIM34Q9BYJ4 488 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 ANO3Q9BYT9 981 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 KCNMB3Q9NPA1 279 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 MYO6Q9UM54 1294 aa19.99■□□□□ 0.79
PDLIM7-207ENST00000486828 SIK3Q9Y2K2 1263 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms