RNA–Protein interactions for RNA: ENST00000486728.5

TNFRSF18-204, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 727 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-204ENST00000486728 PDCD2LQ9BRP1 358 aa22.74■■□□□ 1.23
TNFRSF18-204ENST00000486728 MTMR10Q9NXD2 777 aa22.74■■□□□ 1.23
TNFRSF18-204ENST00000486728 MRVI1Q9Y6F6 885 aa22.74■■□□□ 1.23
TNFRSF18-204ENST00000486728 EPHB4P54760 987 aa22.73■■□□□ 1.23
TNFRSF18-204ENST00000486728 EXOSC10Q01780 885 aaKnown RBP22.73■■□□□ 1.23
TNFRSF18-204ENST00000486728 TSGA10IPQ3SY00 556 aa22.73■■□□□ 1.23
TNFRSF18-204ENST00000486728 Q7L0L9 218 aa22.73■■□□□ 1.23
TNFRSF18-204ENST00000486728 MTIF3Q9H2K0 278 aaKnown RBP22.73■■□□□ 1.23
TNFRSF18-204ENST00000486728 SLC12A7Q9Y666 1083 aa22.73■■□□□ 1.23
TNFRSF18-204ENST00000486728 CSF2RAP15509 400 aa22.72■■□□□ 1.23
TNFRSF18-204ENST00000486728 CASTP20810 708 aaKnown RBP22.72■■□□□ 1.23
TNFRSF18-204ENST00000486728 CCND2P30279 289 aa22.72■■□□□ 1.23
TNFRSF18-204ENST00000486728 LY6KQ17RY6 165 aa22.72■■□□□ 1.23
TNFRSF18-204ENST00000486728 FAM47CQ5HY64 1035 aa22.72■■□□□ 1.23
TNFRSF18-204ENST00000486728 SYNE3Q6ZMZ3 975 aa22.72■■□□□ 1.23
TNFRSF18-204ENST00000486728 EMID1Q96A84 441 aaPredicted RBP22.72■■□□□ 1.23
TNFRSF18-204ENST00000486728 STXBP5LQ9Y2K9 1186 aa22.72■■□□□ 1.23
TNFRSF18-204ENST00000486728 TMEM265A0A087WTH1 108 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 MMP3P08254 477 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 MYCLP12524 364 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 LAMC2Q13753 1193 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 KRT32Q14532 448 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 PGM5Q15124 567 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 DGKDQ16760 1214 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 DHX32Q7L7V1 743 aaKnown RBP22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 SGMS1Q86VZ5 419 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 CUL5Q93034 780 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 TRPV6Q9H1D0 765 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 IL23AQ9NPF7 189 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 DDX41Q9UJV9 622 aaKnown RBP22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 DOCK5Q9H7D0 1870 aa22.71■■□□□ 1.23
TNFRSF18-204ENST00000486728 hCG_1642624A0A1W2PR95 340 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 STAM2O75886 525 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 TGFB3P10600 412 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 CPA1P15085 419 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 CYP2C18P33260 490 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 ARHGAP1Q07960 439 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 NBPF20Q3BBV1 942 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 VSIG10LQ86VR7 867 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 FCHSD1Q86WN1 690 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 MICU3Q86XE3 530 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 RPUSD2Q8IZ73 545 aaKnown RBP22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 CCDC82Q8N4S0 544 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 FANCBQ8NB91 859 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 IL31RAQ8NI17 732 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 AFG1LQ8WV93 481 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 ZFP91Q96JP5 570 aaPredicted RBP22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 NOC4LQ9BVI4 516 aaKnown RBP22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 KATNAL1Q9BW62 490 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 PPP4R2Q9NY27 417 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 BRPF3Q9ULD4 1205 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 SCN10AQ9Y5Y9 1956 aa22.7■■□□□ 1.22
TNFRSF18-204ENST00000486728 GNPTABQ3T906 1256 aa22.69■■□□□ 1.22
TNFRSF18-204ENST00000486728 TMEM240Q5SV17 173 aa22.69■■□□□ 1.22
TNFRSF18-204ENST00000486728 DHX37Q8IY37 1157 aaKnown RBP22.69■■□□□ 1.22
TNFRSF18-204ENST00000486728 PPTC7Q8NI37 304 aa22.69■■□□□ 1.22
TNFRSF18-204ENST00000486728 PPP1R13LQ8WUF5 828 aa22.69■■□□□ 1.22
TNFRSF18-204ENST00000486728 KCNB2Q92953 911 aa22.69■■□□□ 1.22
TNFRSF18-204ENST00000486728 NOD1Q9Y239 953 aa22.69■■□□□ 1.22
TNFRSF18-204ENST00000486728 RGS20O76081 388 aa22.68■■□□□ 1.22
TNFRSF18-204ENST00000486728 PFKMP08237 780 aa22.68■■□□□ 1.22
TNFRSF18-204ENST00000486728 HSPA4P34932 840 aa22.68■■□□□ 1.22
TNFRSF18-204ENST00000486728 APOA5Q6Q788 366 aa22.68■■□□□ 1.22
TNFRSF18-204ENST00000486728 SMARCC2Q8TAQ2 1214 aa22.68■■□□□ 1.22
TNFRSF18-204ENST00000486728 TRMT13Q9NUP7 481 aaKnown RBP22.68■■□□□ 1.22
TNFRSF18-204ENST00000486728 SNX14Q9Y5W7 946 aa22.68■■□□□ 1.22
TNFRSF18-204ENST00000486728 HMGB1P09429 215 aaKnown RBP22.67■■□□□ 1.22
TNFRSF18-204ENST00000486728 TMTC3Q6ZXV5 915 aa22.67■■□□□ 1.22
TNFRSF18-204ENST00000486728 CCDC155Q8N6L0 562 aa22.67■■□□□ 1.22
TNFRSF18-204ENST00000486728 RBM28Q9NW13 759 aaKnown RBP22.67■■□□□ 1.22
TNFRSF18-204ENST00000486728 FRMPD4Q14CM0 1322 aa22.66■■□□□ 1.22
TNFRSF18-204ENST00000486728 FGBP02675 491 aa22.66■■□□□ 1.22
TNFRSF18-204ENST00000486728 CCL23P55773 120 aa22.66■■□□□ 1.22
TNFRSF18-204ENST00000486728 BFSP2Q13515 415 aa22.66■■□□□ 1.22
TNFRSF18-204ENST00000486728 USP17L6PQ6QN14 398 aa22.66■■□□□ 1.22
TNFRSF18-204ENST00000486728 ZNF365Q70YC5 407 aa22.66■■□□□ 1.22
TNFRSF18-204ENST00000486728 SESTD1Q86VW0 696 aa22.66■■□□□ 1.22
TNFRSF18-204ENST00000486728 HERVK_113Q902F9 699 aa22.66■■□□□ 1.22
TNFRSF18-204ENST00000486728 JAKMIP1Q96N16 626 aaKnown RBP22.66■■□□□ 1.22
TNFRSF18-204ENST00000486728 PIK3CDO00329 1044 aa22.65■■□□□ 1.22
TNFRSF18-204ENST00000486728 PITPNM1O00562 1244 aa22.65■■□□□ 1.22
TNFRSF18-204ENST00000486728 ACRP10323 421 aa22.65■■□□□ 1.22
TNFRSF18-204ENST00000486728 RFC2P35250 354 aa22.65■■□□□ 1.22
TNFRSF18-204ENST00000486728 CELF3Q5SZQ8 465 aaKnown RBP22.65■■□□□ 1.22
TNFRSF18-204ENST00000486728 RASIP1Q5U651 963 aa22.65■■□□□ 1.22
TNFRSF18-204ENST00000486728 XRRA1Q6P2D8 792 aa22.65■■□□□ 1.22
TNFRSF18-204ENST00000486728 C16orf59Q7L2K0 433 aa22.65■■□□□ 1.22
TNFRSF18-204ENST00000486728 RETREG2Q8NC44 543 aa22.65■■□□□ 1.22
TNFRSF18-204ENST00000486728 UMODL1Q5DID0 1318 aa22.64■■□□□ 1.22
TNFRSF18-204ENST00000486728 CYP2C9P11712 490 aa22.64■■□□□ 1.21
TNFRSF18-204ENST00000486728 CHMP4BP1P59074 171 aa22.64■■□□□ 1.21
TNFRSF18-204ENST00000486728 GPKOWQ92917 476 aaPredicted RBP eCLIP22.64■■□□□ 1.21
TNFRSF18-204ENST00000486728 FAM161BQ96MY7 647 aa22.64■■□□□ 1.21
TNFRSF18-204ENST00000486728 SPATA33Q96N06 139 aa22.64■■□□□ 1.21
TNFRSF18-204ENST00000486728 WNT8AQ9H1J5 351 aa22.64■■□□□ 1.21
TNFRSF18-204ENST00000486728 SEMA6BQ9H3T3 888 aa22.64■■□□□ 1.21
TNFRSF18-204ENST00000486728 MLXIPQ9HAP2 919 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms