RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 SRCAPQ6ZRS2 3230 aa24.32■■□□□ 1.48
TRADD-202ENST00000486556 MRFAP1L1Q96HT8 127 aa24.32■■□□□ 1.48
TRADD-202ENST00000486556 PNMA5Q96PV4 448 aa24.32■■□□□ 1.48
TRADD-202ENST00000486556 C7orf25Q9BPX7 421 aa24.32■■□□□ 1.48
TRADD-202ENST00000486556 GTPBP4Q9BZE4 634 aaKnown RBP24.32■■□□□ 1.48
TRADD-202ENST00000486556 KDM3AQ9Y4C1 1321 aa24.32■■□□□ 1.48
TRADD-202ENST00000486556 GOLGA6L6A8MZA4 724 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 ZNF658Q5TYW1 1059 aaPredicted RBP24.31■■□□□ 1.48
TRADD-202ENST00000486556 SV2BQ7L1I2 683 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 PNMA8AQ86V59 439 aaPredicted RBP24.31■■□□□ 1.48
TRADD-202ENST00000486556 ATG4CQ96DT6 458 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 LRRC27Q9C0I9 530 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 IGLV3-22A0A075B6J6 115 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 CDC25BP30305 580 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 TMEM119Q4V9L6 283 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 DLK2Q6UY11 383 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 LRRC15Q8TF66 581 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 CDCA5Q96FF9 252 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 MAF1Q9H063 256 aa24.31■■□□□ 1.48
TRADD-202ENST00000486556 TAF1DQ9H5J8 278 aaPredicted RBP24.31■■□□□ 1.48
TRADD-202ENST00000486556 ATP2A1O14983 1001 aa24.3■■□□□ 1.48
TRADD-202ENST00000486556 MSH4O15457 936 aa24.3■■□□□ 1.48
TRADD-202ENST00000486556 PPATQ06203 517 aa24.3■■□□□ 1.48
TRADD-202ENST00000486556 ANKRD13AQ8IZ07 590 aa24.3■■□□□ 1.48
TRADD-202ENST00000486556 CCDC47Q96A33 483 aaKnown RBP24.3■■□□□ 1.48
TRADD-202ENST00000486556 TRERF1Q96PN7 1200 aa24.3■■□□□ 1.48
TRADD-202ENST00000486556 BLOC1S4Q9NUP1 217 aa24.3■■□□□ 1.48
TRADD-202ENST00000486556 NFIBO00712 420 aa24.29■■□□□ 1.48
TRADD-202ENST00000486556 TPM3P06753 285 aa24.29■■□□□ 1.48
TRADD-202ENST00000486556 CEP55Q53EZ4 464 aa24.29■■□□□ 1.48
TRADD-202ENST00000486556 REPS2Q8NFH8 660 aa24.29■■□□□ 1.48
TRADD-202ENST00000486556 LARP4BQ92615 738 aaKnown RBP24.29■■□□□ 1.48
TRADD-202ENST00000486556 GJA10Q969M2 543 aa24.29■■□□□ 1.48
TRADD-202ENST00000486556 NUDT12Q9BQG2 462 aa24.29■■□□□ 1.48
TRADD-202ENST00000486556 TRIM9Q9C026 710 aa24.29■■□□□ 1.48
TRADD-202ENST00000486556 SCN4AP35499 1836 aa24.29■■□□□ 1.48
TRADD-202ENST00000486556 SPIRE1Q08AE8 756 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 HAUS3Q68CZ6 603 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 ERMNQ8TAM6 284 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 HSD3B7Q9H2F3 369 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 RPTORQ8N122 1335 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 PPP1R3GB7ZBB8 358 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 RHOBTB3O94955 611 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 CCT6AP40227 531 aaKnown RBP24.28■■□□□ 1.48
TRADD-202ENST00000486556 SETQ01105 290 aaPredicted RBP24.28■■□□□ 1.48
TRADD-202ENST00000486556 MUM1L1Q5H9M0 696 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 ERO1BQ86YB8 467 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 CYP2W1Q8TAV3 490 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 RAD54LQ92698 747 aa24.28■■□□□ 1.48
TRADD-202ENST00000486556 MEIS1O00470 390 aa24.27■■□□□ 1.48
TRADD-202ENST00000486556 KLRC4O43908 158 aa24.27■■□□□ 1.48
TRADD-202ENST00000486556 TKFCQ3LXA3 575 aa24.27■■□□□ 1.48
TRADD-202ENST00000486556 KCTD17Q8N5Z5 321 aa24.27■■□□□ 1.48
TRADD-202ENST00000486556 PARP14Q460N5 1801 aa24.27■■□□□ 1.48
TRADD-202ENST00000486556 CXCL11O14625 94 aa24.26■■□□□ 1.47
TRADD-202ENST00000486556 FMR1Q06787 632 aaKnown RBP eCLIP24.26■■□□□ 1.47
TRADD-202ENST00000486556 KMT5BQ4FZB7 885 aa24.26■■□□□ 1.47
TRADD-202ENST00000486556 CNNM4Q6P4Q7 775 aa24.26■■□□□ 1.47
TRADD-202ENST00000486556 ZSCAN30Q86W11 494 aa24.26■■□□□ 1.47
TRADD-202ENST00000486556 SYTL5Q8TDW5 730 aaPredicted RBP24.26■■□□□ 1.47
TRADD-202ENST00000486556 FANCLQ9NW38 375 aa24.26■■□□□ 1.47
TRADD-202ENST00000486556 ESPNB1AK53 854 aa24.26■■□□□ 1.47
TRADD-202ENST00000486556 POTECB2RU33 542 aa24.26■■□□□ 1.47
TRADD-202ENST00000486556 CD44P16070 742 aaKnown RBP24.26■■□□□ 1.47
TRADD-202ENST00000486556 NIPA1Q7RTP0 329 aa24.26■■□□□ 1.47
TRADD-202ENST00000486556 ZNF214Q9UL59 606 aaPredicted RBP24.26■■□□□ 1.47
TRADD-202ENST00000486556 RLFQ13129 1914 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 PVALEFA0A1B0GWK0 134 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 BCRP11274 1271 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 RPA1P27694 616 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 HOXA7P31268 230 aaPredicted RBP24.25■■□□□ 1.47
TRADD-202ENST00000486556 RPS6P62753 249 aaKnown RBP24.25■■□□□ 1.47
TRADD-202ENST00000486556 EAPPQ56P03 285 aaPredicted RBP24.25■■□□□ 1.47
TRADD-202ENST00000486556 SPATA1Q5VX52 437 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 RNF207Q6ZRF8 634 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 DRC7Q8IY82 874 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 PROCA1Q8NCQ7 364 aaPredicted RBP24.25■■□□□ 1.47
TRADD-202ENST00000486556 SLC5A5Q92911 643 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 WNK4Q96J92 1243 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 MXRA8Q9BRK3 442 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 HOMER2Q9NSB8 354 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 COL20A1Q9P218 1284 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 NFE2L3Q9Y4A8 694 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 PAPPA2Q9BXP8 1791 aa24.25■■□□□ 1.47
TRADD-202ENST00000486556 MCM6Q14566 821 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 ECM1Q16610 540 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 PCNX4Q63HM2 1172 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 ARMC9Q7Z3E5 817 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 TEX13BQ9BXU2 312 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 RNF146Q9NTX7 359 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 VAV3Q9UKW4 847 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 FRMPD4Q14CM0 1322 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 SPDYE5A6NIY4 337 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 PPP1R2P41236 205 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 FANCCQ00597 558 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 TTLL12Q14166 644 aaPredicted RBP24.24■■□□□ 1.47
TRADD-202ENST00000486556 TMEM132BQ14DG7 1078 aa24.24■■□□□ 1.47
TRADD-202ENST00000486556 SNRNP48Q6IEG0 339 aaKnown RBP24.24■■□□□ 1.47
TRADD-202ENST00000486556 GIMAP8Q8ND71 665 aaPredicted RBP24.24■■□□□ 1.47
TRADD-202ENST00000486556 MED15Q96RN5 788 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms