RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 BLOC1S2Q6QNY1 142 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 CMTR1Q8N1G2 835 aaKnown RBP14.87□□□□□ -0.03
CHMP3-208ENST00000486404 FANCBQ8NB91 859 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 COPS5Q92905 334 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 PDCD2LQ9BRP1 358 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 MTG1Q9BT17 334 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-208ENST00000486404 SEZ6LQ9BYH1 1024 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 KPNA6O60684 536 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 ARIH2O95376 493 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 HSPA4P34932 840 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 PSMC6P62333 389 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 PURAQ00577 322 aaKnown RBP14.86□□□□□ -0.03
CHMP3-208ENST00000486404 PGM5Q15124 567 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 FAM47CQ5HY64 1035 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 HEATR3Q7Z4Q2 680 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 FAM126BQ8IXS8 530 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 CCDC82Q8N4S0 544 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 SRBD1Q8N5C6 995 aaKnown RBP14.86□□□□□ -0.03
CHMP3-208ENST00000486404 TBX21Q9UL17 535 aa14.86□□□□□ -0.03
CHMP3-208ENST00000486404 SOX1O00570 391 aaPredicted RBP14.85□□□□□ -0.03
CHMP3-208ENST00000486404 PSMA5P28066 241 aa14.85□□□□□ -0.03
CHMP3-208ENST00000486404 CDK7P50613 346 aa14.85□□□□□ -0.03
CHMP3-208ENST00000486404 CHMP4BP1P59074 171 aa14.85□□□□□ -0.03
CHMP3-208ENST00000486404 EXOSC10Q01780 885 aaKnown RBP14.85□□□□□ -0.03
CHMP3-208ENST00000486404 LY6KQ17RY6 165 aa14.85□□□□□ -0.03
CHMP3-208ENST00000486404 LRIT3Q3SXY7 679 aa14.85□□□□□ -0.03
CHMP3-208ENST00000486404 IL31RAQ8NI17 732 aa14.85□□□□□ -0.03
CHMP3-208ENST00000486404 PPP1R12CQ9BZL4 782 aa14.85□□□□□ -0.03
CHMP3-208ENST00000486404 SNX14Q9Y5W7 946 aa14.85□□□□□ -0.03
CHMP3-208ENST00000486404 CNTNAP5Q8WYK1 1306 aa14.85□□□□□ -0.03
CHMP3-208ENST00000486404 hCG_1642624A0A1W2PR95 340 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 A6NJR5 290 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 MMP3P08254 477 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 ARHGAP1Q07960 439 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 GNPTABQ3T906 1256 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 CCDC62Q6P9F0 684 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 KCNV1Q6PIU1 500 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 Q6ZUG5 572 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 AFG1LQ8WV93 481 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 LRCH3Q96II8 777 aa14.84□□□□□ -0.03
CHMP3-208ENST00000486404 TIMP1P01033 207 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 CPA1P15085 419 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 CASTP20810 708 aaKnown RBP14.83□□□□□ -0.04
CHMP3-208ENST00000486404 ITGB8P26012 769 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 METAP2P50579 478 aaKnown RBP eCLIP14.83□□□□□ -0.04
CHMP3-208ENST00000486404 RCAN1P53805 252 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 PPIGQ13427 754 aaKnown RBP eCLIP14.83□□□□□ -0.047e-11■■□□□ 12.6
CHMP3-208ENST00000486404 DHX37Q8IY37 1157 aaKnown RBP14.83□□□□□ -0.04
CHMP3-208ENST00000486404 TMEM199Q8N511 208 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 SLC43A3Q8NBI5 491 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 GPKOWQ92917 476 aaPredicted RBP eCLIP14.83□□□□□ -0.04
CHMP3-208ENST00000486404 BRF1Q92994 677 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 RNPC3Q96LT9 517 aaKnown RBP14.83□□□□□ -0.04
CHMP3-208ENST00000486404 ALDH8A1Q9H2A2 487 aaPredicted RBP14.83□□□□□ -0.04
CHMP3-208ENST00000486404 HIPK3Q9H422 1215 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 DDX41Q9UJV9 622 aaKnown RBP14.83□□□□□ -0.04
CHMP3-208ENST00000486404 BRPF3Q9ULD4 1205 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 NOD1Q9Y239 953 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 FRMPD4Q14CM0 1322 aa14.83□□□□□ -0.04
CHMP3-208ENST00000486404 CCDC196A0A1B0GTZ2 297 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 SPDYE3A6NKU9 549 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 PIK3CDO00329 1044 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 B4GALT4O60513 344 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 STAM2O75886 525 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 RPS6KB1P23443 525 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 NAPAP54920 295 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 APOBRQ0VD83 1088 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 LAMC2Q13753 1193 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 DGKDQ16760 1214 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 PPP1R18Q6NYC8 613 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 USP17L6PQ6QN14 398 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 VSIG10LQ86VR7 867 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 KCNB2Q92953 911 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 TRPV6Q9H1D0 765 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 PSTPIP2Q9H939 334 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 EHMT1Q9H9B1 1298 aa14.82□□□□□ -0.04
CHMP3-208ENST00000486404 EPB41L2O43491 1005 aaKnown RBP14.81□□□□□ -0.04
CHMP3-208ENST00000486404 SORBS3O60504 671 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 GGPS1O95749 300 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 CD4P01730 458 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 SUPT20HL2P0C7V6 817 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 UBA1P22314 1058 aaKnown RBP14.81□□□□□ -0.04
CHMP3-208ENST00000486404 SHHQ15465 462 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 NBPF20Q3BBV1 942 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 C9orf50Q5SZB4 431 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 MFSD5Q6N075 450 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 NFRKBQ6P4R8 1299 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 PPTC7Q8NI37 304 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 EMID1Q96A84 441 aaPredicted RBP14.81□□□□□ -0.04
CHMP3-208ENST00000486404 ZFP91Q96JP5 570 aaPredicted RBP14.81□□□□□ -0.04
CHMP3-208ENST00000486404 SPATA33Q96N06 139 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 KATNAL1Q9BW62 490 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 TRMT13Q9NUP7 481 aaKnown RBP14.81□□□□□ -0.04
CHMP3-208ENST00000486404 GRIN2DO15399 1336 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 LAMA3Q16787 3333 aa14.81□□□□□ -0.04
CHMP3-208ENST00000486404 SCN5AQ14524 2016 aa14.8□□□□□ -0.04
CHMP3-208ENST00000486404 hCG_1984214I3L0E3 225 aa14.8□□□□□ -0.04
CHMP3-208ENST00000486404 NOP56O00567 594 aaKnown RBP14.8□□□□□ -0.04
CHMP3-208ENST00000486404 ZNF286BP0CG31 522 aa14.8□□□□□ -0.04
CHMP3-208ENST00000486404 CYP2C18P33260 490 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms