RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 GRK2P25098 689 aa8.58□□□□□ -1.04
RTN4-214ENST00000486085 GRK3P35626 688 aa8.58□□□□□ -1.04
RTN4-214ENST00000486085 TM4SF20Q53R12 229 aa8.58□□□□□ -1.04
RTN4-214ENST00000486085 ZC3H7AQ8IWR0 971 aaKnown RBP8.58□□□□□ -1.04
RTN4-214ENST00000486085 PCDH19Q8TAB3 1148 aa8.58□□□□□ -1.04
RTN4-214ENST00000486085 CDIP1Q9H305 208 aa8.58□□□□□ -1.04
RTN4-214ENST00000486085 X6R8D5 127 aa8.58□□□□□ -1.04
RTN4-214ENST00000486085 FAM47E-STBD1D6RA91 191 aa8.57□□□□□ -1.04
RTN4-214ENST00000486085 ARVCFO00192 962 aa8.57□□□□□ -1.04
RTN4-214ENST00000486085 BIN1O00499 593 aa8.57□□□□□ -1.04
RTN4-214ENST00000486085 NTRK1P04629 796 aa8.57□□□□□ -1.04
RTN4-214ENST00000486085 MYCLP1P12525 358 aaPredicted RBP8.57□□□□□ -1.04
RTN4-214ENST00000486085 ZNF460Q14592 562 aa8.57□□□□□ -1.04
RTN4-214ENST00000486085 COA3Q9Y2R0 106 aaPredicted RBP8.57□□□□□ -1.04
RTN4-214ENST00000486085 YBX2Q9Y2T7 364 aaKnown RBP8.57□□□□□ -1.04
RTN4-214ENST00000486085 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
RTN4-214ENST00000486085 IGFALSP35858 605 aa8.56□□□□□ -1.04
RTN4-214ENST00000486085 MASP1P48740 699 aa8.56□□□□□ -1.04
RTN4-214ENST00000486085 RBM10P98175 930 aaKnown RBP8.56□□□□□ -1.04
RTN4-214ENST00000486085 KCNMB1Q16558 191 aa8.56□□□□□ -1.04
RTN4-214ENST00000486085 RNF187Q5TA31 235 aaPredicted RBP8.56□□□□□ -1.04
RTN4-214ENST00000486085 LRRTM3Q86VH5 581 aa8.56□□□□□ -1.04
RTN4-214ENST00000486085 ZSWIM9Q86XI8 627 aa8.56□□□□□ -1.04
RTN4-214ENST00000486085 INTS7Q9NVH2 962 aaKnown RBP8.56□□□□□ -1.04
RTN4-214ENST00000486085 KCNA6P17658 529 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 DNM2P50570 870 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 ADGRF1Q5T601 910 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 MROH9Q5TGP6 573 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 ABHD17CQ6PCB6 329 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 FILIP1Q7Z7B0 1213 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 CABP7Q86V35 215 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 Q8N1Y9 231 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 FBXW5Q969U6 566 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 RXFP1Q9HBX9 757 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 CATSPERZQ9NTU4 200 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 COQ6Q9Y2Z9 468 aa8.55□□□□□ -1.04
RTN4-214ENST00000486085 DGKIO75912 1065 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 GLI1P08151 1106 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 JMJD7P0C870 316 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 GLI4P10075 376 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 PYGMP11217 842 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 PDE6BP35913 854 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 IRAK1P51617 712 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 NEK4P51957 841 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 ST5P78524 1137 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 WWC2Q6AWC2 1192 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 DDX1Q92499 740 aaKnown RBP8.54□□□□□ -1.04
RTN4-214ENST00000486085 INTS4Q96HW7 963 aaKnown RBP8.54□□□□□ -1.04
RTN4-214ENST00000486085 TARS2Q9BW92 718 aaKnown RBP8.54□□□□□ -1.04
RTN4-214ENST00000486085 TNFRSF12AQ9NP84 129 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 PRKAB1Q9Y478 270 aa8.54□□□□□ -1.04
RTN4-214ENST00000486085 A0A087X0B3 334 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 ZC3H12DA2A288 527 aaKnown RBP8.53□□□□□ -1.04
RTN4-214ENST00000486085 CCDC66A2RUB6 948 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 NUDT19A8MXV4 375 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 B4E1Z4 1266 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 PAPLNO95428 1278 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 MPOP05164 745 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 CKMP06732 381 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 DBHP09172 617 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 GNAT1P11488 350 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 COL6A2P12110 1019 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 FLT3P36888 993 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 ERVFRD-1P60508 538 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 FAM47CQ5HY64 1035 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 ZCCHC8Q6NZY4 707 aaKnown RBP8.53□□□□□ -1.04
RTN4-214ENST00000486085 UBE2R2Q712K3 238 aaPredicted RBP8.53□□□□□ -1.04
RTN4-214ENST00000486085 RIOX2Q8IUF8 465 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 IGSF22Q8N9C0 903 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 SLC6A17Q9H1V8 727 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 EPB41L1Q9H4G0 881 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 SPC25Q9HBM1 224 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 SIT1Q9Y3P8 196 aa8.53□□□□□ -1.04
RTN4-214ENST00000486085 PDE8AO60658 829 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 DNAJC6O75061 913 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 RAB3GAP1Q15042 981 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 CFAP100Q494V2 611 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 PIK3R6Q5UE93 754 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 CDCA2Q69YH5 1023 aaPredicted RBP8.52□□□□□ -1.05
RTN4-214ENST00000486085 C16orf59Q7L2K0 433 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 DDX53Q86TM3 631 aaKnown RBP8.52□□□□□ -1.05
RTN4-214ENST00000486085 PIP4K2CQ8TBX8 421 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 FAM168AQ92567 244 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 IFT57Q9NWB7 429 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 DBR1Q9UK59 544 aaKnown RBP8.52□□□□□ -1.05
RTN4-214ENST00000486085 CBLCQ9ULV8 474 aa8.52□□□□□ -1.05
RTN4-214ENST00000486085 F8W031 263 aaPredicted RBP8.51□□□□□ -1.05
RTN4-214ENST00000486085 WNT9AO14904 365 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 GSTA4O15217 222 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 KPNA6O60684 536 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 CYBBP04839 570 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 ITGB5P18084 799 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 SPIRE1Q08AE8 756 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 CRY1Q16526 586 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 PAQR3Q6TCH7 311 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 MPZL3Q6UWV2 235 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 OTOP3Q7RTS5 596 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 THNSL2Q86YJ6 484 aa8.51□□□□□ -1.05
RTN4-214ENST00000486085 CISD2Q8N5K1 135 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms