RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
COL9A1-207ENST00000486080 IGSF22Q8N9C0 903 aa16.3■□□□□ 0.2
COL9A1-207ENST00000486080 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
COL9A1-207ENST00000486080 TIGD1Q96MW7 591 aa16.3■□□□□ 0.2
COL9A1-207ENST00000486080 RMDN3Q96TC7 470 aa16.3■□□□□ 0.2
COL9A1-207ENST00000486080 FRMPD4Q14CM0 1322 aa16.3■□□□□ 0.2
COL9A1-207ENST00000486080 MSH4O15457 936 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 ACTN4O43707 911 aaKnown RBP16.29■□□□□ 0.2
COL9A1-207ENST00000486080 KARSQ15046 597 aaKnown RBP16.29■□□□□ 0.2
COL9A1-207ENST00000486080 RGMBQ6NW40 437 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 DHX58Q96C10 678 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 PXMP2Q9NR77 195 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 PNMA3Q9UL41 463 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 SLC45A1Q9Y2W3 748 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 RABGAP1Q9Y3P9 1069 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 POTEMA6NI47 508 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 CTAGE5O15320 804 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 FOXN1O15353 648 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 ERCC3P19447 782 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 UBA7P41226 1012 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 PGM5Q15124 567 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 TMEM266Q2M3C6 531 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 CEP55Q53EZ4 464 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 PLA2G4DQ86XP0 818 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 CNNM3Q8NE01 707 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 AK8Q96MA6 479 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 LRWD1Q9UFC0 647 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 PCDHA12Q9UN75 941 aa16.29■□□□□ 0.2
COL9A1-207ENST00000486080 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
COL9A1-207ENST00000486080 PDIA5Q14554 519 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 E2F4Q16254 413 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 ARHGEF16Q5VV41 709 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 SLFN12Q8IYM2 578 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 ANKRD35Q8N283 1001 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 SMCR8Q8TEV9 937 aaPredicted RBP16.28■□□□□ 0.2
COL9A1-207ENST00000486080 PLIN2Q99541 437 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 PDCD2LQ9BRP1 358 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 FUCA2Q9BTY2 467 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 MMTAG2Q9BU76 263 aaKnown RBP16.28■□□□□ 0.2
COL9A1-207ENST00000486080 CCSER1Q9C0I3 900 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 TLL2Q9Y6L7 1015 aa16.28■□□□□ 0.2
COL9A1-207ENST00000486080 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.2
COL9A1-207ENST00000486080 MEIS1O00470 390 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 ARP10275 920 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 MYCLP12524 364 aaPredicted RBP16.27■□□□□ 0.2
COL9A1-207ENST00000486080 ITGB5P18084 799 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 TXLNAP40222 546 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 ERVK-24P63145 666 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 CNTN2Q02246 1040 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 ZRSR1Q15695 479 aaKnown RBP16.27■□□□□ 0.2
COL9A1-207ENST00000486080 CABP7Q86V35 215 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 GRAMD1CQ8IYS0 662 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 MXRA8Q9BRK3 442 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 FBXO40Q9UH90 709 aa16.27■□□□□ 0.2
COL9A1-207ENST00000486080 A0A087WWV3 80 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 FSD2A1L4K1 749 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 TBX3O15119 743 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 MDM2Q00987 491 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-207ENST00000486080 PNOCQ13519 176 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 LRRC15Q8TF66 581 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 NUDT12Q9BQG2 462 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 TSPY26PQ9H489 355 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 ABT1Q9ULW3 272 aaKnown RBP16.26■□□□□ 0.19
COL9A1-207ENST00000486080 TESPA1A2RU30 521 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-207ENST00000486080 SLC25A27O95847 323 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 SLC10A3P09131 477 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 SLFN14P0C7P3 912 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 FAM20AQ96MK3 541 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 RAB34Q9BZG1 259 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 WDR11Q9BZH6 1224 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 DISC1Q9NRI5 854 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 UBIAD1Q9Y5Z9 338 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 KIAA1217Q5T5P2 1943 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 ASTN1O14525 1302 aa16.26■□□□□ 0.19
COL9A1-207ENST00000486080 GOLGA6L3A6NEY3 463 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 TOMM70O94826 608 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 NR3C2P08235 984 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 PRR29P0C7W0 189 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 TYRO3Q06418 890 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 SPIRE1Q08AE8 756 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 NAALADL2Q58DX5 795 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 PDXDC2PQ6P474 469 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 IQUBQ8NA54 791 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 RASSF8Q8NHQ8 419 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 NSUN6Q8TEA1 469 aaKnown RBP16.25■□□□□ 0.19
COL9A1-207ENST00000486080 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 MAF1Q9H063 256 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 PORCNQ9H237 461 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 KIAA1468Q9P260 1216 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 PFASO15067 1338 aa16.25■□□□□ 0.19
COL9A1-207ENST00000486080 FAM155AB1AL88 458 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-207ENST00000486080 IGF2BP3O00425 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL9A1-207ENST00000486080 PLCG1P19174 1290 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 STAT6P42226 847 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 AFMP43652 599 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 RRAGBQ5VZM2 374 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 VSIG10LQ86VR7 867 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms