RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 Q4G0T1 1027 aa18.03■□□□□ 0.48
APOE-205ENST00000485628 FOXD4L5Q5VV16 416 aaPredicted RBP18.03■□□□□ 0.48
APOE-205ENST00000485628 DPP9Q86TI2 863 aa18.03■□□□□ 0.48
APOE-205ENST00000485628 FOXD4L4Q8WXT5 416 aaPredicted RBP18.03■□□□□ 0.48
APOE-205ENST00000485628 INPP4AQ96PE3 977 aaPredicted RBP18.03■□□□□ 0.48
APOE-205ENST00000485628 APBA2Q99767 749 aa18.03■□□□□ 0.48
APOE-205ENST00000485628 FLRT1Q9NZU1 646 aa18.03■□□□□ 0.48
APOE-205ENST00000485628 PCDHB6Q9Y5E3 794 aa18.03■□□□□ 0.48
APOE-205ENST00000485628 DDX49Q9Y6V7 483 aaKnown RBP18.03■□□□□ 0.48
APOE-205ENST00000485628 SYNGAP1Q96PV0 1343 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 HTTP42858 3142 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 ASB14A6NK59 587 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 FOXN1O15353 648 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 SNAI1O95863 264 aaPredicted RBP18.02■□□□□ 0.48
APOE-205ENST00000485628 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.48
APOE-205ENST00000485628 FLT3LGP49771 235 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 PRKCZQ05513 592 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 GNL2Q13823 731 aaKnown RBP18.02■□□□□ 0.48
APOE-205ENST00000485628 PTPAQ15257 358 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 CYP2W1Q8TAV3 490 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 TNPO1Q92973 898 aaKnown RBP18.02■□□□□ 0.48
APOE-205ENST00000485628 USP28Q96RU2 1077 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 MXRA8Q9BRK3 442 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 POLR3EQ9NVU0 708 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 SLC5A4Q9NY91 659 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 RTEL1Q9NZ71 1219 aa18.02■□□□□ 0.48
APOE-205ENST00000485628 EIF3JO75822 258 aaKnown RBP18.01■□□□□ 0.47
APOE-205ENST00000485628 TDP2O95551 362 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 HOXD10P28358 340 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 CCND2P30279 289 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 ICAM3P32942 547 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 PRMT2P55345 433 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 UBXN2AP68543 259 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 DNM1Q05193 864 aaKnown RBP18.01■□□□□ 0.47
APOE-205ENST00000485628 SEMA3FQ13275 785 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 NBR1Q14596 966 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 STXBP2Q15833 593 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 CEP55Q53EZ4 464 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 TTC38Q5R3I4 469 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 ARMCX2Q7L311 632 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 CHAMP1Q96JM3 812 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 MTMR9Q96QG7 549 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 NAP1L4Q99733 375 aaKnown RBP18.01■□□□□ 0.47
APOE-205ENST00000485628 TINF2Q9BSI4 451 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 KCNMB3Q9NPA1 279 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 JADE2Q9NQC1 790 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 NOL7Q9UMY1 257 aaKnown RBP18.01■□□□□ 0.47
APOE-205ENST00000485628 ATP6V1DQ9Y5K8 247 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 CLIC4Q9Y696 253 aa18.01■□□□□ 0.47
APOE-205ENST00000485628 RBM47A0AV96 593 aaKnown RBP18■□□□□ 0.47
APOE-205ENST00000485628 MAFGO15525 162 aa18■□□□□ 0.47
APOE-205ENST00000485628 SLC37A4O43826 429 aa18■□□□□ 0.47
APOE-205ENST00000485628 CCL14Q16627 93 aa18■□□□□ 0.47
APOE-205ENST00000485628 LETM2Q2VYF4 491 aa18■□□□□ 0.47
APOE-205ENST00000485628 OTOP1Q7RTM1 612 aa18■□□□□ 0.47
APOE-205ENST00000485628 ETNPPLQ8TBG4 499 aa18■□□□□ 0.47
APOE-205ENST00000485628 FTOQ9C0B1 505 aaKnown RBP eCLIP18■□□□□ 0.47
APOE-205ENST00000485628 B4DLN1 442 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 CYP2B6P20813 491 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 SLC39A14Q15043 492 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 ARHGEF6Q15052 776 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 ZNF174Q15697 407 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 ANO1Q5XXA6 986 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 TAPT1Q6NXT6 567 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 LINC00301Q8NCQ3 95 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 PXYLP1Q8TE99 480 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 TRIB2Q92519 343 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 HAS1Q92839 578 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 GPRASP2Q96D09 838 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 TMEM60Q9H2L4 133 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.99■□□□□ 0.47
APOE-205ENST00000485628 RCOR1Q9UKL0 485 aa17.99■□□□□ 0.47
APOE-205ENST00000485628 SPATA31C2B4DYI2 1134 aa17.98■□□□□ 0.47
APOE-205ENST00000485628 TBX3O15119 743 aa17.98■□□□□ 0.47
APOE-205ENST00000485628 CCNT1O60563 726 aaKnown RBP17.98■□□□□ 0.47
APOE-205ENST00000485628 ECM2O94769 699 aaPredicted RBP17.98■□□□□ 0.47
APOE-205ENST00000485628 YEATS4O95619 227 aa17.98■□□□□ 0.47
APOE-205ENST00000485628 HSPA1AP0DMV8 641 aaKnown RBP17.98■□□□□ 0.47
APOE-205ENST00000485628 HSPA1BP0DMV9 641 aaKnown RBP17.98■□□□□ 0.47
APOE-205ENST00000485628 ATP2C1P98194 919 aaPredicted RBP17.98■□□□□ 0.47
APOE-205ENST00000485628 SF3A1Q15459 793 aaKnown RBP17.98■□□□□ 0.47
APOE-205ENST00000485628 CCDC62Q6P9F0 684 aa17.98■□□□□ 0.47
APOE-205ENST00000485628 TRMT44Q8IYL2 757 aaKnown RBP17.98■□□□□ 0.47
APOE-205ENST00000485628 ZNF396Q96N95 335 aaPredicted RBP17.98■□□□□ 0.47
APOE-205ENST00000485628 WDR11Q9BZH6 1224 aa17.98■□□□□ 0.47
APOE-205ENST00000485628 TFIP11Q9UBB9 837 aaKnown RBP17.98■□□□□ 0.47
APOE-205ENST00000485628 MSH4O15457 936 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 DHX15O43143 795 aaKnown RBP17.97■□□□□ 0.47
APOE-205ENST00000485628 ZNF865P0CJ78 1059 aaPredicted RBP17.97■□□□□ 0.47
APOE-205ENST00000485628 ARP10275 920 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 MYCLP12524 364 aaPredicted RBP17.97■□□□□ 0.47
APOE-205ENST00000485628 MCM7P33993 719 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 PRPHP41219 470 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 PDE4DQ08499 809 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 PTGDRQ13258 359 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 MAP3K21Q5TCX8 1036 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 B3GNT9Q6UX72 402 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 ZFP91Q96JP5 570 aaPredicted RBP17.97■□□□□ 0.47
APOE-205ENST00000485628 FAM20AQ96MK3 541 aa17.97■□□□□ 0.47
APOE-205ENST00000485628 MPHOSPH6Q99547 160 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms