RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 PP2D1A8MPX8 630 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 MBD3O95983 291 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 PFKFB1P16118 471 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 ITGB5P18084 799 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 PRPHP41219 470 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 NDUFA8P51970 172 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 CALCRLQ16602 461 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 DEFB115Q30KQ5 88 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 Q4G0T1 1027 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 SHCBP1Q8NEM2 672 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 MRPS27Q92552 414 aaKnown RBP16.49■□□□□ 0.23
LRIF1-202ENST00000485275 FERMT2Q96AC1 680 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 PLXNA1Q9UIW2 1896 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 HPSEQ9Y251 543 aa16.49■□□□□ 0.23
LRIF1-202ENST00000485275 PFASO15067 1338 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 DNAJC25-GNG10A0A024R161 153 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 A0A087X0B3 334 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 FAM237AA0A1B0GTK4 181 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 GOLGA6L4A6NEF3 574 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 SOWAHBA6NEL2 793 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 PGK2P07205 417 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 CMA1P23946 247 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 INHBEP58166 350 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 SREBF2Q12772 1141 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 CRHR2Q13324 411 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 PCNX4Q63HM2 1172 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 CAVIN1Q6NZI2 390 aaKnown RBP16.48■□□□□ 0.23
LRIF1-202ENST00000485275 FAM133AQ8N9E0 248 aa16.48■□□□□ 0.23
LRIF1-202ENST00000485275 ZNF579Q8NAF0 562 aaKnown RBP16.48■□□□□ 0.23
LRIF1-202ENST00000485275 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
LRIF1-202ENST00000485275 LAD1O00515 517 aa16.47■□□□□ 0.23
LRIF1-202ENST00000485275 MSH4O15457 936 aa16.47■□□□□ 0.23
LRIF1-202ENST00000485275 CDC25AP30304 524 aa16.47■□□□□ 0.23
LRIF1-202ENST00000485275 FMR1NBQ8N0W7 255 aaPredicted RBP16.47■□□□□ 0.23
LRIF1-202ENST00000485275 SYMPKQ92797 1274 aaKnown RBP16.47■□□□□ 0.23
LRIF1-202ENST00000485275 MROH8Q9H579 483 aa16.47■□□□□ 0.23
LRIF1-202ENST00000485275 DACT1Q9NYF0 836 aa16.47■□□□□ 0.23
LRIF1-202ENST00000485275 ZNF236Q9UL36 1845 aa16.47■□□□□ 0.23
LRIF1-202ENST00000485275 MCM3APO60318 1980 aa16.47■□□□□ 0.23
LRIF1-202ENST00000485275 ARP10275 920 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 COPB2P35606 906 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 TXKP42681 527 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 NOGQ13253 232 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 CEP55Q53EZ4 464 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 ARHGEF16Q5VV41 709 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 MMP19Q99542 508 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 MAF1Q9H063 256 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 EHMT1Q9H9B1 1298 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 UBIAD1Q9Y5Z9 338 aa16.46■□□□□ 0.23
LRIF1-202ENST00000485275 POTEMA6NI47 508 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 MEIS1O00470 390 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 TLR2O60603 784 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 RGS20O76081 388 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 TECP42680 631 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 ALDH5A1P51649 535 aaPredicted RBP16.46■□□□□ 0.22
LRIF1-202ENST00000485275 SPIRE1Q08AE8 756 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 SKOR2Q2VWA4 1001 aaPredicted RBP16.46■□□□□ 0.22
LRIF1-202ENST00000485275 DTHD1Q6ZMT9 781 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 IGSF22Q8N9C0 903 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 NAP1L4Q99733 375 aaKnown RBP16.46■□□□□ 0.22
LRIF1-202ENST00000485275 MXRA8Q9BRK3 442 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 WDR11Q9BZH6 1224 aa16.46■□□□□ 0.22
LRIF1-202ENST00000485275 DOCK3Q8IZD9 2030 aa16.45■□□□□ 0.22
LRIF1-202ENST00000485275 DOCK5Q9H7D0 1870 aa16.45■□□□□ 0.22
LRIF1-202ENST00000485275 POTEB2H3BUK9 544 aa16.45■□□□□ 0.22
LRIF1-202ENST00000485275 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
LRIF1-202ENST00000485275 NR3C2P08235 984 aa16.45■□□□□ 0.22
LRIF1-202ENST00000485275 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
LRIF1-202ENST00000485275 ZNF76P36508 570 aa16.45■□□□□ 0.22
LRIF1-202ENST00000485275 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
LRIF1-202ENST00000485275 GPR142Q7Z601 462 aa16.45■□□□□ 0.22
LRIF1-202ENST00000485275 VSIG10LQ86VR7 867 aa16.45■□□□□ 0.22
LRIF1-202ENST00000485275 NSUN6Q8TEA1 469 aaKnown RBP16.45■□□□□ 0.22
LRIF1-202ENST00000485275 GZF1Q9H116 711 aaPredicted RBP16.45■□□□□ 0.22
LRIF1-202ENST00000485275 TTC12Q9H892 705 aaPredicted RBP16.45■□□□□ 0.22
LRIF1-202ENST00000485275 FCER1AP12319 257 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 EDNRBP24530 442 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 LONP1P36776 959 aaKnown RBP16.44■□□□□ 0.22
LRIF1-202ENST00000485275 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■■□□ 15.9
LRIF1-202ENST00000485275 CCNA1P78396 465 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 SEMA3FQ13275 785 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 KCTD2Q14681 263 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 PLA2G4DQ86XP0 818 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 DNERQ8NFT8 737 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 LRRC15Q8TF66 581 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 MMTAG2Q9BU76 263 aaKnown RBP16.44■□□□□ 0.22
LRIF1-202ENST00000485275 VAV3Q9UKW4 847 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 CENPFP49454 3210 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 MGAMO43451 1857 aa16.44■□□□□ 0.22
LRIF1-202ENST00000485275 COBLO75128 1261 aa16.43■□□□□ 0.22
LRIF1-202ENST00000485275 ADORA2AP29274 412 aa16.43■□□□□ 0.22
LRIF1-202ENST00000485275 CTGFP29279 349 aa16.43■□□□□ 0.22
LRIF1-202ENST00000485275 VEGFBP49765 207 aa16.43■□□□□ 0.22
LRIF1-202ENST00000485275 CCDC73Q6ZRK6 1079 aa16.43■□□□□ 0.22
LRIF1-202ENST00000485275 JADE2Q9NQC1 790 aa16.43■□□□□ 0.22
LRIF1-202ENST00000485275 KCNH7Q9NS40 1196 aa16.43■□□□□ 0.22
LRIF1-202ENST00000485275 CEP350Q5VT06 3117 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms