RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SAPCD2Q86UD0 394 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 FAM124AQ86V42 546 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 CXorf38Q8TB03 319 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 KCTD13Q8WZ19 329 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 DPF3Q92784 378 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 TEPSINQ96N21 525 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 SPATA25Q9BR10 227 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 FBLN5Q9UBX5 448 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
SMC4-215ENST00000484799 A0A1B0GTL3 188 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 IQCA1LA6NCM1 817 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 U2SURPO15042 1029 aaKnown RBP6.6□□□□□ -1.35
SMC4-215ENST00000484799 MAFKO60675 156 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 DGKIO75912 1065 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 PLA2G1BP04054 148 aaKnown RBP6.6□□□□□ -1.35
SMC4-215ENST00000484799 FBLN1P23142 703 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 NKX3-2P78367 333 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 MBLAC2Q68D91 279 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 ANKS3Q6ZW76 656 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 CARFQ8N187 725 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 TTLL6Q8N841 843 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 TP53I13Q8NBR0 393 aaPredicted RBP6.6□□□□□ -1.35
SMC4-215ENST00000484799 NPLOC4Q8TAT6 608 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 TRIM55Q9BYV6 548 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 CLDND1Q9NY35 253 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 PALD1Q9ULE6 856 aa6.6□□□□□ -1.35
SMC4-215ENST00000484799 HGSO14964 777 aaPredicted RBP6.59□□□□□ -1.35
SMC4-215ENST00000484799 SGSM2O43147 1006 aa6.59□□□□□ -1.35
SMC4-215ENST00000484799 FPR2P25090 351 aa6.59□□□□□ -1.35
SMC4-215ENST00000484799 BUD31P41223 144 aaPredicted RBP6.59□□□□□ -1.35
SMC4-215ENST00000484799 KIAA2012Q0VF49 1180 aa6.59□□□□□ -1.35
SMC4-215ENST00000484799 HSP90AA2PQ14568 343 aaPredicted RBP6.59□□□□□ -1.35
SMC4-215ENST00000484799 ACBD5Q5T8D3 534 aaPredicted RBP6.59□□□□□ -1.35
SMC4-215ENST00000484799 RIOX2Q8IUF8 465 aa6.59□□□□□ -1.35
SMC4-215ENST00000484799 ADAM7Q9H2U9 754 aa6.59□□□□□ -1.35
SMC4-215ENST00000484799 SH3D21A4FU49 640 aa6.58□□□□□ -1.36
SMC4-215ENST00000484799 H7BY64 318 aa6.58□□□□□ -1.36
SMC4-215ENST00000484799 TBX1O43435 398 aa6.58□□□□□ -1.36
SMC4-215ENST00000484799 SCG5P05408 212 aa6.58□□□□□ -1.36
SMC4-215ENST00000484799 SLC6A11P48066 632 aa6.58□□□□□ -1.36
SMC4-215ENST00000484799 PRSS53Q2L4Q9 553 aa6.58□□□□□ -1.36
SMC4-215ENST00000484799 SLC43A3Q8NBI5 491 aa6.58□□□□□ -1.36
SMC4-215ENST00000484799 TMEM145Q8NBT3 493 aa6.58□□□□□ -1.36
SMC4-215ENST00000484799 HNRNPLLQ8WVV9 542 aaKnown RBP6.58□□□□□ -1.36
SMC4-215ENST00000484799 DDX1Q92499 740 aaKnown RBP6.58□□□□□ -1.36
SMC4-215ENST00000484799 KRIT1O00522 736 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 FGRP09769 529 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 HTRA3P83110 453 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 SF1Q15637 639 aaKnown RBP6.57□□□□□ -1.36
SMC4-215ENST00000484799 VWA3BQ502W6 1294 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 STEAP3Q658P3 488 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 USP53Q70EK8 1073 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 PRRT2Q7Z6L0 340 aaPredicted RBP6.57□□□□□ -1.36
SMC4-215ENST00000484799 MCF2L2Q86YR7 1114 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 KYQ8NBH2 561 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 RCBTB1Q8NDN9 531 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 MICAL1Q8TDZ2 1067 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 ZNF428Q96B54 188 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 IPO9Q96P70 1041 aaKnown RBP6.57□□□□□ -1.36
SMC4-215ENST00000484799 NOX5Q96PH1 765 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 BDH2Q9BUT1 245 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 TMEFF2Q9UIK5 374 aaPredicted RBP6.57□□□□□ -1.36
SMC4-215ENST00000484799 NUB1Q9Y5A7 615 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 X6R8D5 127 aa6.57□□□□□ -1.36
SMC4-215ENST00000484799 CYP7B1O75881 506 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 STK10O94804 968 aaKnown RBP6.56□□□□□ -1.36
SMC4-215ENST00000484799 GFRA1P56159 465 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 PPP2R2AP63151 447 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 PRAMEF18Q5VWM3 479 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 STK32CQ86UX6 486 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 FERMT3Q86UX7 667 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 TOE1Q96GM8 510 aaKnown RBP6.56□□□□□ -1.36
SMC4-215ENST00000484799 TINF2Q9BSI4 451 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 IER2Q9BTL4 223 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 C11orf84Q9BUA3 381 aaPredicted RBP6.56□□□□□ -1.36
SMC4-215ENST00000484799 EPB41L1Q9H4G0 881 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 PCDHB4Q9Y5E5 795 aa6.56□□□□□ -1.36
SMC4-215ENST00000484799 CYP1A1P04798 512 aaPredicted RBP6.55□□□□□ -1.36
SMC4-215ENST00000484799 APPP05067 770 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 STAT5AP42229 794 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 SLC10A6Q3KNW5 377 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 BORAQ6PGQ7 559 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 DPH6Q7L8W6 267 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 CCDC103Q8IW40 242 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 TRIM48Q8IWZ4 208 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 CKAP2LQ8IYA6 745 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 FAM26EQ8N5C1 309 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 CLIC6Q96NY7 704 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 GORASP1Q9BQQ3 440 aa6.55□□□□□ -1.36
SMC4-215ENST00000484799 A0A1W2PQU0 124 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 C8BP07358 591 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 LCP1P13796 627 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 MAP4K2Q12851 820 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 RTP5Q14D33 572 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 DDR2Q16832 855 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 MRM1Q6IN84 353 aaKnown RBP6.54□□□□□ -1.36
SMC4-215ENST00000484799 MIB1Q86YT6 1006 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 LRRC47Q8N1G4 583 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms