RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 A0A1W2PQD8 194 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 B4DLN1 442 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 TRAK2O60296 914 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 CCNT1O60563 726 aaKnown RBP15.85■□□□□ 0.13
SMAD9-204ENST00000483941 SGPL1O95470 568 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 BCRP11274 1271 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 SREBF1P36956 1147 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 PTPAQ15257 358 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 ZNF174Q15697 407 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 KLHL40Q2TBA0 621 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 EARS2Q5JPH6 523 aaKnown RBP15.85■□□□□ 0.13
SMAD9-204ENST00000483941 XRRA1Q6P2D8 792 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 ZNF579Q8NAF0 562 aaKnown RBP15.85■□□□□ 0.13
SMAD9-204ENST00000483941 SHCBP1Q8NEM2 672 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 CLEC4DQ8WXI8 215 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 MPHOSPH6Q99547 160 aaKnown RBP15.85■□□□□ 0.13
SMAD9-204ENST00000483941 MROH8Q9H579 483 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 TMEM260Q9NX78 707 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 SRPRBQ9Y5M8 271 aaKnown RBP15.85■□□□□ 0.13
SMAD9-204ENST00000483941 NEMFO60524 1076 aa15.84■□□□□ 0.13
SMAD9-204ENST00000483941 CYP3A4P08684 503 aa15.84■□□□□ 0.13
SMAD9-204ENST00000483941 MCM7P33993 719 aa15.84■□□□□ 0.13
SMAD9-204ENST00000483941 PRPHP41219 470 aa15.84■□□□□ 0.13
SMAD9-204ENST00000483941 ATP2C1P98194 919 aaPredicted RBP15.84■□□□□ 0.13
SMAD9-204ENST00000483941 FCHSD1Q86WN1 690 aa15.84■□□□□ 0.13
SMAD9-204ENST00000483941 CCAR1Q8IX12 1150 aaKnown RBP15.84■□□□□ 0.13
SMAD9-204ENST00000483941 GPRC5AQ8NFJ5 357 aa15.84■□□□□ 0.13
SMAD9-204ENST00000483941 PYM1Q9BRP8 204 aaKnown RBP15.84■□□□□ 0.13
SMAD9-204ENST00000483941 RAB34Q9BZG1 259 aa15.84■□□□□ 0.13
SMAD9-204ENST00000483941 HOMER2Q9NSB8 354 aa15.84■□□□□ 0.13
SMAD9-204ENST00000483941 GABRQQ9UN88 632 aa15.84■□□□□ 0.13
SMAD9-204ENST00000483941 CYP3A7-CYP3A51PA0A087WV96 503 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 OPLAHO14841 1288 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 ADCY3O60266 1144 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 MARCH6O60337 910 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 INHAP05111 366 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 CYP2C8P10632 490 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 PTPREP23469 700 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 CMA1P23946 247 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 CYP3A7P24462 503 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 HOXA13P31271 388 aaPredicted RBP15.83■□□□□ 0.12
SMAD9-204ENST00000483941 ZNF76P36508 570 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 ARHGAP4P98171 946 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 PTGDRQ13258 359 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 DTHD1Q6ZMT9 781 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 CCDC73Q6ZRK6 1079 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.83■□□□□ 0.12
SMAD9-204ENST00000483941 CCDC34Q96HJ3 373 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 CHAMP1Q96JM3 812 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 PAGR1Q9BTK6 254 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 FAM13BQ9NYF5 915 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 PCDHA7Q9UN72 937 aa15.83■□□□□ 0.12
SMAD9-204ENST00000483941 FAM205CA6NFA0 338 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 NFIBO00712 420 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 TBX3O15119 743 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 ELNP15502 786 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 CAPN2P17655 700 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 CIITAP33076 1130 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 RPS6P62753 249 aaKnown RBP15.82■□□□□ 0.12
SMAD9-204ENST00000483941 TMEM266Q2M3C6 531 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 NSMFQ6X4W1 530 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 NCAPG2Q86XI2 1143 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 SLFN12Q8IYM2 578 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 ANKRD35Q8N283 1001 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 MRPS27Q92552 414 aaKnown RBP15.82■□□□□ 0.12
SMAD9-204ENST00000483941 AK8Q96MA6 479 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 DEFB118Q96PH6 123 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 FTOQ9C0B1 505 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMAD9-204ENST00000483941 BTBD7Q9P203 1132 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 RBPJLQ9UBG7 517 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 DDX25Q9UHL0 483 aaKnown RBP15.82■□□□□ 0.12
SMAD9-204ENST00000483941 STK24Q9Y6E0 443 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 DOCK3Q8IZD9 2030 aa15.82■□□□□ 0.12
SMAD9-204ENST00000483941 EYSQ5T1H1 3165 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 STAM2O75886 525 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 TFRCP02786 760 aaKnown RBP15.81■□□□□ 0.12
SMAD9-204ENST00000483941 OR52Z1P0C646 297 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 VCANP13611 3396 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 MARCKSP29966 332 aaPredicted RBP15.81■□□□□ 0.12
SMAD9-204ENST00000483941 LONP1P36776 959 aaKnown RBP15.81■□□□□ 0.12
SMAD9-204ENST00000483941 TXLNAP40222 546 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 FLT3LGP49771 235 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 ERVK-9P63128 1117 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 ERVK-24P63145 666 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 SETQ01105 290 aaPredicted RBP15.81■□□□□ 0.12
SMAD9-204ENST00000483941 NBR1Q14596 966 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 CALCRLQ16602 461 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 Q4G0T1 1027 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 MUM1L1Q5H9M0 696 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 GPR153Q6NV75 609 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 DNERQ8NFT8 737 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 SYTL5Q8TDW5 730 aaPredicted RBP15.81■□□□□ 0.12
SMAD9-204ENST00000483941 NSUN6Q8TEA1 469 aaKnown RBP15.81■□□□□ 0.12
SMAD9-204ENST00000483941 MOV10L1Q9BXT6 1211 aaKnown RBP15.81■□□□□ 0.12
SMAD9-204ENST00000483941 MORF4L1Q9UBU8 362 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 ADD3Q9UEY8 706 aaKnown RBP15.81■□□□□ 0.12
SMAD9-204ENST00000483941 RIPK3Q9Y572 518 aa15.81■□□□□ 0.12
SMAD9-204ENST00000483941 LOC102724159A0A0B4J2E5 919 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 ADAMTS3O15072 1205 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 STRNO43815 780 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms