RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 CCDC120Q96HB5 630 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 KCNJ15Q99712 375 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 CABP5Q9NP86 173 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 MARCH2Q9P0N8 246 aa10.42□□□□□ -0.74
MCF2-207ENST00000483690 ANGEL1Q9UNK9 670 aaKnown RBP10.42□□□□□ -0.74
MCF2-207ENST00000483690 WTIPA6NIX2 430 aaPredicted RBP10.41□□□□□ -0.74
MCF2-207ENST00000483690 ALG1L2C9J202 215 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 CBX4O00257 560 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 PYGMP11217 842 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 SSTR4P31391 388 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 CORO7P57737 925 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 EVA1CP58658 441 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 CHRNEQ04844 493 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 FERMT3Q86UX7 667 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 NLRP10Q86W26 655 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 WFDC3Q8IUB2 231 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 NLGN2Q8NFZ4 835 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 CATSPERZQ9NTU4 200 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 TAF6LQ9Y6J9 622 aa10.41□□□□□ -0.74
MCF2-207ENST00000483690 BRINP1O60477 761 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 MED26O95402 600 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 EYA4O95677 639 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 CD97P48960 835 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 HK2P52789 917 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 HSF5Q4G112 596 aaPredicted RBP10.4□□□□□ -0.74
MCF2-207ENST00000483690 C16orf59Q7L2K0 433 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 SPPL2CQ8IUH8 684 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 TEX2Q8IWB9 1127 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 OXR1Q8N573 874 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 USP33Q8TEY7 942 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 STAG1Q8WVM7 1258 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 TTC1Q99614 292 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 CDIP1Q9H305 208 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 PRDM7Q9NQW5 492 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.4□□□□□ -0.74
MCF2-207ENST00000483690 ADGRE2Q9UHX3 823 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 COA3Q9Y2R0 106 aaPredicted RBP10.4□□□□□ -0.74
MCF2-207ENST00000483690 RWDD3Q9Y3V2 267 aa10.4□□□□□ -0.74
MCF2-207ENST00000483690 FUCA1P04066 466 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 PDGFRBP09619 1106 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 FPR2P25090 351 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 PMLP29590 882 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 CRY1Q16526 586 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 GALNT18Q6P9A2 607 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 SLC23A3Q6PIS1 610 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 Q8N1Y9 231 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 PDZD8Q8NEN9 1154 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 PI4K2BQ8TCG2 481 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 JAM3Q9BX67 310 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 IFT22Q9H7X7 185 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 METTL14Q9HCE5 456 aaKnown RBP10.39□□□□□ -0.75
MCF2-207ENST00000483690 ZKSCAN5Q9Y2L8 839 aa10.39□□□□□ -0.75
MCF2-207ENST00000483690 KIAA1324LA8MWY0 1029 aaPredicted RBP10.38□□□□□ -0.75
MCF2-207ENST00000483690 C22orf46C9J442 243 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 GAS7O60861 476 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 PPP1R11O60927 126 aaPredicted RBP10.38□□□□□ -0.75
MCF2-207ENST00000483690 GNAT1P11488 350 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 SPINK2P20155 84 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 FUT4P22083 530 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 SKOR2Q2VWA4 1001 aaPredicted RBP10.38□□□□□ -0.75
MCF2-207ENST00000483690 OVCH1Q7RTY7 1134 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 CISD2Q8N5K1 135 aaKnown RBP10.38□□□□□ -0.75
MCF2-207ENST00000483690 LZTR1Q8N653 840 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 CHST14Q8NCH0 376 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 WDR66Q8TBY9 1149 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 IMPACTQ9P2X3 320 aa10.38□□□□□ -0.75
MCF2-207ENST00000483690 FITM1A5D6W6 292 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 ZNF891A8MT65 544 aaPredicted RBP10.37□□□□□ -0.75
MCF2-207ENST00000483690 F2P00734 622 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 SPIRE1Q08AE8 756 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 FAM50AQ14320 339 aaKnown RBP10.37□□□□□ -0.75
MCF2-207ENST00000483690 PLEKHG6Q3KR16 790 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 NXPE1Q8N323 547 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 ASIC4Q96FT7 647 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 CEP89Q96ST8 783 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 EPB41L1Q9H4G0 881 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 PAK6Q9NQU5 681 aaPredicted RBP10.37□□□□□ -0.75
MCF2-207ENST00000483690 B4GALT6Q9UBX8 382 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 CBLCQ9ULV8 474 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 X6R8D5 127 aa10.37□□□□□ -0.75
MCF2-207ENST00000483690 TRAF5O00463 557 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 NRDCO43847 1150 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 ZEB2O60315 1214 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 IL2P60568 153 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 DSG1Q02413 1049 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 STAT4Q14765 748 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 RNF219Q5W0B1 726 aaPredicted RBP10.36□□□□□ -0.75
MCF2-207ENST00000483690 C2orf69Q8N8R5 385 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 NUP43Q8NFH3 380 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 PLEKHO2Q8TD55 490 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 MTA3Q9BTC8 594 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 IRF2BPLQ9H1B7 796 aa10.36□□□□□ -0.75
MCF2-207ENST00000483690 DGKIO75912 1065 aa10.35□□□□□ -0.75
MCF2-207ENST00000483690 BPIP17213 487 aa10.35□□□□□ -0.75
MCF2-207ENST00000483690 MECP2P51608 486 aaKnown RBP10.35□□□□□ -0.75
MCF2-207ENST00000483690 GUCY2FP51841 1108 aa10.35□□□□□ -0.75
MCF2-207ENST00000483690 MROH9Q5TGP6 573 aa10.35□□□□□ -0.75
MCF2-207ENST00000483690 PDLIM7Q9NR12 457 aa10.35□□□□□ -0.75
MCF2-207ENST00000483690 APOBEC2Q9Y235 224 aaKnown RBP10.35□□□□□ -0.75
MCF2-207ENST00000483690 A0A1W2PQJ5 194 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms