RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 PIGWQ7Z7B1 504 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ARHGAP18Q8N392 663 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 RHPN1Q8TCX5 695 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 DDX17Q92841 729 aaKnown RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 KLHL29Q96CT2 875 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ABHD8Q96I13 439 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 COG3Q96JB2 828 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 HIC2Q96JB3 615 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF317Q96PQ6 595 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 XPO6Q96QU8 1125 aaKnown RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 MPHOSPH6Q99547 160 aaKnown RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 LLPHQ9BRT6 129 aaKnown RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 PPP1R12CQ9BZL4 782 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 FAM192AQ9GZU8 254 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 GGT7Q9UJ14 662 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF180Q9UJW8 692 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 R3HDM2Q9Y2K5 976 aaKnown RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 MYH10P35580 1976 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 DCDC2CA8MYV0 355 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 GLI1P08151 1106 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 CALB2P22676 271 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 STIP1P31948 543 aaKnown RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 CACNA2D1P54289 1103 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 MECOMQ03112 1051 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 MCM10Q7L590 875 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 NME8Q8N427 588 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 OR2W6PQ8NHA6 318 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 WDR66Q8TBY9 1149 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 FBF1Q8TES7 1133 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 SPATA16Q9BXB7 569 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 CCDC87Q9NVE4 849 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 EHD2Q9NZN4 543 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ADD3Q9UEY8 706 aaKnown RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 TRIM33Q9UPN9 1127 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 HPSEQ9Y251 543 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ATP7BP35670 1465 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 PPLO60437 1756 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 HTR3EA5X5Y0 456 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 GCOM1H8Y6P7 765 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-205ENST00000483338 PRC1O43663 620 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 WFS1O76024 890 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 MYZAPP0CAP1 466 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 MARCKSP29966 332 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-205ENST00000483338 CD97P48960 835 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 ZC2HC1CQ53FD0 456 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-205ENST00000483338 BEND3Q5T5X7 828 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 TBC1D9BQ66K14 1250 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 THOC7Q6I9Y2 204 aaKnown RBP8.57□□□□□ -1.04
COL4A5-205ENST00000483338 DNAJC9Q8WXX5 260 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 TAF4BQ92750 862 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 ABTB1Q969K4 478 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-205ENST00000483338 PPP2R3CQ969Q6 453 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 LRRC2Q9BYS8 371 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 RNPEPL1Q9HAU8 725 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 SLAIN2Q9P270 581 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 ZRANB1Q9UGI0 708 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 CROTQ9UKG9 612 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 TMED5Q9Y3A6 229 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 USH1CQ9Y6N9 552 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 JCADQ9P266 1359 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 MYH2Q9UKX2 1941 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 ANO9A1A5B4 782 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 TOM1O60784 492 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 ASLP04424 464 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 TPBGLP0DKB5 382 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 ETS2P15036 469 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 RASIP1Q5U651 963 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 OTUD7BQ6GQQ9 843 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 SULT6B1Q6IMI4 303 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 ARHGAP27Q6ZUM4 889 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 DEPTORQ8TB45 409 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 IFT81Q8WYA0 676 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 GBP5Q96PP8 586 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 CENPOQ9BU64 300 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 DDX21Q9NR30 783 aaKnown RBP eCLIP8.57□□□□□ -1.04
COL4A5-205ENST00000483338 DAAM1Q9Y4D1 1078 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 N6AMT1Q9Y5N5 214 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 N4BP2Q86UW6 1770 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-205ENST00000483338 BCL9O00512 1426 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 MYH7BA7E2Y1 1941 aa8.57□□□□□ -1.04
COL4A5-205ENST00000483338 RCCD1A6NED2 376 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 E7ENQ6 273 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 H0YGN5 161 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 CETN3O15182 167 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 AKR1B10O60218 316 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 LDHAP00338 332 aaKnown RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ITGA2BP08514 1039 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 GALNTL6Q49A17 601 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 SLC44A4Q53GD3 710 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ODF2Q5BJF6 829 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ERMARDQ5T6L9 678 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 SHC4Q6S5L8 630 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 CCDC129Q6ZRS4 1044 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ASRGL1Q7L266 308 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 CACNA2D4Q7Z3S7 1137 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 SCUBE1Q8IWY4 988 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 TRIML1Q8N9V2 468 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 MDM1Q8TC05 714 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 PPP1R14BQ96C90 147 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 GDF3Q9NR23 364 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms