RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 GH1P01241 217 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
VARS-226ENST00000483275 MFAP1P55081 439 aaKnown RBP16.25■□□□□ 0.19
VARS-226ENST00000483275 DEFB103AP81534 67 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 TAP1Q03518 808 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 GPNMBQ14956 572 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 CHD1LQ86WJ1 897 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 IQCA1Q86XH1 822 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 SMC5Q8IY18 1101 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 STAG2Q8N3U4 1231 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
VARS-226ENST00000483275 YTHDC1Q96MU7 727 aaKnown RBP16.25■□□□□ 0.19
VARS-226ENST00000483275 SLC9A7Q96T83 725 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 JMJD4Q9H9V9 463 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 PNMA2Q9UL42 364 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 MTCH2Q9Y6C9 303 aa16.25■□□□□ 0.19
VARS-226ENST00000483275 OPLAHO14841 1288 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 KPNA6O60684 536 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 PPP1R11O60927 126 aaPredicted RBP16.24■□□□□ 0.19
VARS-226ENST00000483275 CFBP00751 764 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 COL9A1P20849 921 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 RFC2P35250 354 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 BFSP2Q13515 415 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 ASPRV1Q53RT3 343 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 ARHGEF16Q5VV41 709 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 FBXO11Q86XK2 927 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 NSUN6Q8TEA1 469 aaKnown RBP16.24■□□□□ 0.19
VARS-226ENST00000483275 WNT8BQ93098 351 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 ZSWIM5Q9P217 1185 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 HDAC6Q9UBN7 1215 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 SIP14410 1827 aa16.24■□□□□ 0.19
VARS-226ENST00000483275 MICAL3Q7RTP6 2002 aa16.23■□□□□ 0.19
VARS-226ENST00000483275 B4DLN1 442 aa16.23■□□□□ 0.19
VARS-226ENST00000483275 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
VARS-226ENST00000483275 HOXA13P31271 388 aaPredicted RBP16.23■□□□□ 0.19
VARS-226ENST00000483275 MRPL12P52815 198 aaKnown RBP16.23■□□□□ 0.19
VARS-226ENST00000483275 WDR5P61964 334 aaKnown RBP16.23■□□□□ 0.19
VARS-226ENST00000483275 ZNF200P98182 395 aaPredicted RBP16.23■□□□□ 0.19
VARS-226ENST00000483275 NUCB1Q02818 461 aa16.23■□□□□ 0.19
VARS-226ENST00000483275 PTPN11Q06124 597 aaPredicted RBP16.23■□□□□ 0.19
VARS-226ENST00000483275 STXBP2Q15833 593 aa16.23■□□□□ 0.19
VARS-226ENST00000483275 RGS22Q8NE09 1264 aa16.23■□□□□ 0.19
VARS-226ENST00000483275 IL31RAQ8NI17 732 aa16.23■□□□□ 0.19
VARS-226ENST00000483275 GDPD5Q8WTR4 605 aa16.23■□□□□ 0.19
VARS-226ENST00000483275 PXMP2Q9NR77 195 aa16.23■□□□□ 0.19
VARS-226ENST00000483275 MTUS1Q9ULD2 1270 aa16.23■□□□□ 0.19
VARS-226ENST00000483275 TLL1O43897 1013 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 NBNO60934 754 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 MYCLP12524 364 aaPredicted RBP16.22■□□□□ 0.19
VARS-226ENST00000483275 KCNJ6P48051 423 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 PSEN2P49810 448 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 HIC1Q14526 733 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 SLC35G1Q2M3R5 365 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 FAM117BQ6P1L5 589 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 LRRC8DQ7L1W4 858 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 EXOC6Q8TAG9 804 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.19
VARS-226ENST00000483275 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 DDX41Q9UJV9 622 aaKnown RBP16.22■□□□□ 0.19
VARS-226ENST00000483275 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
VARS-226ENST00000483275 MRVI1Q9Y6F6 885 aa16.22■□□□□ 0.19
VARS-226ENST00000483275 GTPBP6O43824 516 aaPredicted RBP16.21■□□□□ 0.19
VARS-226ENST00000483275 BMP1P13497 986 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 SELPP16109 830 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 GRB10Q13322 594 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 MFSD10Q14728 455 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 DGKDQ16760 1214 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 IMMTQ16891 758 aaKnown RBP16.21■□□□□ 0.19
VARS-226ENST00000483275 CYB5R4Q7L1T6 521 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 TICAM2Q86XR7 235 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 HOMER1Q86YM7 354 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 CCDC155Q8N6L0 562 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 C7orf31Q8N865 590 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 AFAP1L1Q8TED9 768 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 ANKS1AQ92625 1134 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 TSPYL2Q9H2G4 693 aaPredicted RBP16.21■□□□□ 0.19
VARS-226ENST00000483275 RWDD1Q9H446 243 aaPredicted RBP16.21■□□□□ 0.19
VARS-226ENST00000483275 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
VARS-226ENST00000483275 LPXNO60711 386 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 RGS20O76081 388 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 NR3C2P08235 984 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 CKBP12277 381 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
VARS-226ENST00000483275 MBTPS1Q14703 1052 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 KIAA0753Q2KHM9 967 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 IFIT1BQ5T764 474 aaKnown RBP16.2■□□□□ 0.18
VARS-226ENST00000483275 SESTD1Q86VW0 696 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 CAGE1Q8TC20 777 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 PHOSPHO2Q8TCD6 241 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 IWS1Q96ST2 819 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 OSBPL3Q9H4L5 887 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 SENP2Q9HC62 589 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 TAF6LQ9Y6J9 622 aa16.2■□□□□ 0.18
VARS-226ENST00000483275 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 BAIAP3O94812 1187 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 F2P00734 622 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 HSD17B4P51659 736 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms