RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 DUSP28Q4G0W2 176 aa10.07□□□□□ -0.8
SNX4-205ENST00000482965 TLK2Q86UE8 772 aa10.07□□□□□ -0.8
SNX4-205ENST00000482965 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
SNX4-205ENST00000482965 IL31RAQ8NI17 732 aa10.07□□□□□ -0.8
SNX4-205ENST00000482965 CCDC12Q8WUD4 166 aaPredicted RBP10.07□□□□□ -0.8
SNX4-205ENST00000482965 KIF2CQ99661 725 aa10.07□□□□□ -0.8
SNX4-205ENST00000482965 SENP6Q9GZR1 1112 aaPredicted RBP10.07□□□□□ -0.8
SNX4-205ENST00000482965 GLT8D2Q9H1C3 349 aa10.07□□□□□ -0.8
SNX4-205ENST00000482965 UPF3AQ9H1J1 476 aaKnown RBP10.07□□□□□ -0.8
SNX4-205ENST00000482965 EHMT1Q9H9B1 1298 aa10.07□□□□□ -0.8
SNX4-205ENST00000482965 RIC8AQ9NPQ8 531 aa10.07□□□□□ -0.8
SNX4-205ENST00000482965 GNEQ9Y223 722 aaKnown RBP10.07□□□□□ -0.8
SNX4-205ENST00000482965 FRMPD4Q14CM0 1322 aa10.07□□□□□ -0.8
SNX4-205ENST00000482965 ESYT2A0FGR8 921 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 MYADML2A6NDP7 307 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 NKRFO15226 690 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNX4-205ENST00000482965 DEXIO95424 95 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 LARGE1O95461 756 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 TXNP10599 105 aaKnown RBP10.06□□□□□ -0.8
SNX4-205ENST00000482965 COL6A1P12109 1028 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 PTGS1P23219 599 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 CST5P28325 142 aaPredicted RBP10.06□□□□□ -0.8
SNX4-205ENST00000482965 RABEP1Q15276 862 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 ME3Q16798 604 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 GNASQ5JWF2 1037 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 TMEM63BQ5T3F8 832 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 VSIG10LQ86VR7 867 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 TEX2Q8IWB9 1127 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 NECAB1Q8N987 351 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 PCSK9Q8NBP7 692 aaKnown RBP10.06□□□□□ -0.8
SNX4-205ENST00000482965 KLHDC9Q8NEP7 349 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 CCDC148Q8NFR7 591 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 OR6J1Q8NGC5 347 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 DPF3Q92784 378 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 TSEN34Q9BSV6 310 aaKnown RBP10.06□□□□□ -0.8
SNX4-205ENST00000482965 PCDHA6Q9UN73 950 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 Q9Y3F1 56 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 PCDHA8Q9Y5H6 950 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 MRVI1Q9Y6F6 885 aa10.06□□□□□ -0.8
SNX4-205ENST00000482965 DOCK5Q9H7D0 1870 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 ZEB2O60315 1214 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 STAM2O75886 525 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 ARIH2O95376 493 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 FOSP01100 380 aaPredicted RBP10.05□□□□□ -0.8
SNX4-205ENST00000482965 GNA11P29992 359 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 ATN1P54259 1190 aaPredicted RBP10.05□□□□□ -0.8
SNX4-205ENST00000482965 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
SNX4-205ENST00000482965 BEX3Q00994 111 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 KCNA10Q16322 511 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 FSCN1Q16658 493 aaKnown RBP10.05□□□□□ -0.8
SNX4-205ENST00000482965 GNPTABQ3T906 1256 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 XRRA1Q6P2D8 792 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 COPS5Q92905 334 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 GTF3C6Q969F1 213 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 ZFP91Q96JP5 570 aaPredicted RBP10.05□□□□□ -0.8
SNX4-205ENST00000482965 TBC1D32Q96NH3 1257 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 BACH2Q9BYV9 841 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 ZMYND12Q9H0C1 365 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 C6orf50Q9HD87 102 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 VPS54Q9P1Q0 977 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 LIMCH1Q9UPQ0 1083 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 PHF24Q9UPV7 400 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 STK36Q9NRP7 1315 aa10.05□□□□□ -0.8
SNX4-205ENST00000482965 A0A1W2PQ45 241 aaPredicted RBP10.04□□□□□ -0.8
SNX4-205ENST00000482965 A0A1W2PQY0 241 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 CTAGE5O15320 804 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 ST18O60284 1047 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 EVI5O60447 810 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 GH1P01241 217 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 ASGR1P07306 291 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 ACLYP53396 1101 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 NLRP5P59047 1200 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 NKX3-2P78367 333 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 MRPS9P82933 396 aaKnown RBP10.04□□□□□ -0.8
SNX4-205ENST00000482965 AP3B2Q13367 1082 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 LY6KQ17RY6 165 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 BRDTQ58F21 947 aaPredicted RBP10.04□□□□□ -0.8
SNX4-205ENST00000482965 JAKMIP3Q5VZ66 844 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 PCNX4Q63HM2 1172 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 CCDC62Q6P9F0 684 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 NLRX1Q86UT6 975 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 REXO1Q8N1G1 1221 aaKnown RBP10.04□□□□□ -0.8
SNX4-205ENST00000482965 BICD2Q8TD16 824 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 VTI1AQ96AJ9 217 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 PGBD1Q96JS3 809 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 ZSCAN31Q96LW9 406 aaPredicted RBP10.04□□□□□ -0.8
SNX4-205ENST00000482965 ANO3Q9BYT9 981 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 SH3GLB2Q9NR46 395 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 TMEM260Q9NX78 707 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 RTEL1Q9NZ71 1219 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 ORC3Q9UBD5 711 aaPredicted RBP10.04□□□□□ -0.8
SNX4-205ENST00000482965 DDX41Q9UJV9 622 aaKnown RBP10.04□□□□□ -0.8
SNX4-205ENST00000482965 BRCA2P51587 3418 aa10.04□□□□□ -0.8
SNX4-205ENST00000482965 DTNBO60941 627 aa10.03□□□□□ -0.8
SNX4-205ENST00000482965 RGS20O76081 388 aa10.03□□□□□ -0.8
SNX4-205ENST00000482965 CTDNEP1O95476 244 aa10.03□□□□□ -0.8
SNX4-205ENST00000482965 XBP1P17861 261 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms