RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 LMBRD1Q9NUN5 540 aa11.58□□□□□ -0.56
HLA-DQA1-206ENST00000482745 KIAA1217Q5T5P2 1943 aa11.58□□□□□ -0.56
HLA-DQA1-206ENST00000482745 PNMA6FA0A0J9YX94 578 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 DCDC2CA8MYV0 355 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 KIF20AO95235 890 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 ZSCAN20P17040 1043 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 EIF2AK2P19525 551 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 ARHGEF16Q5VV41 709 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 MCTP1Q6DN14 999 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TDHQ8IZJ6 230 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TMTC2Q8N394 836 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 MYRIPQ8NFW9 859 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 OR6J1Q8NGC5 347 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 SCFD2Q8WU76 684 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 PRIMPOLQ96LW4 560 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TCEANC2Q96MN5 208 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 NEK1Q96PY6 1258 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 MAF1Q9H063 256 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 Q9Y3F1 56 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 SLC12A7Q9Y666 1083 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 RBM47A0AV96 593 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TRIM43BA6NCK2 446 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 ZEB2O60315 1214 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 HOXA13P31271 388 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 LIFRP42702 1097 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 HSD17B4P51659 736 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 NKX3-2P78367 333 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 HMGN5P82970 282 aaKnown RBP11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TRAF1Q13077 416 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 RABEP1Q15276 862 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 LRSAM1Q6UWE0 723 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 ANKRD33Q7Z3H0 272 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 MICU3Q86XE3 530 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 BADQ92934 168 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TRIM43Q96BQ3 446 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 MAP3K14Q99558 947 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
HLA-DQA1-206ENST00000482745 MROH7Q68CQ1 1323 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 PLEKHA8P1O95397 391 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CALM1P0DP23 149 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CALM2P0DP24 149 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CALM3P0DP25 149 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TXNP10599 105 aaKnown RBP11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 ADCK5Q3MIX3 580 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 SEPT14Q6ZU15 432 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CMTR1Q8N1G2 835 aaKnown RBP11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 COPS5Q92905 334 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 RRP36Q96EU6 259 aaKnown RBP11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 SPZ1Q9BXG8 430 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TMEM39AQ9NV64 488 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 SEC63Q9UGP8 760 aaKnown RBP11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 ARVCFO00192 962 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 SOX1O00570 391 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 RAG1P15918 1043 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 GNAQP50148 359 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 FAAP100Q0VG06 881 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 KRT32Q14532 448 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TTLL4Q14679 1199 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 STXBP2Q15833 593 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TOX2Q96NM4 488 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 IWS1Q96ST2 819 aa11.56□□□□□ -0.56
HLA-DQA1-206ENST00000482745 GCOM1H8Y6P7 765 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 NKRFO15226 690 aaKnown RBP eCLIP11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CABYRO75952 493 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 ARIH2O95376 493 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 MYL3P08590 195 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 POLR2MP0CAP2 368 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 MYCLP12524 364 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 ITGB8P26012 769 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CPT1AP50416 773 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 PSMC6P62333 389 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 SYNE3Q6ZMZ3 975 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 FCHSD1Q86WN1 690 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CCDC82Q8N4S0 544 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 SRBD1Q8N5C6 995 aaKnown RBP11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 LZTS2Q9BRK4 669 aa11.55□□□□□ -0.56
HLA-DQA1-206ENST00000482745 KIAA0355O15063 1070 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 LETM1O95202 739 aaPredicted RBP11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 NR3C2P08235 984 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CDK7P50613 346 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 GHRHRQ02643 423 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 ITGA7Q13683 1181 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 BRDTQ58F21 947 aaPredicted RBP11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 DHX32Q7L7V1 743 aaKnown RBP11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 SGMS1Q86VZ5 419 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 PDCD2LQ9BRP1 358 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 MAP3K20Q9NYL2 800 aaKnown RBP11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 hCG_1642624A0A1W2PR95 340 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TLR3O15455 904 aaKnown RBP11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 REC8O95072 547 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 LY6KQ17RY6 165 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 TSGA10IPQ3SY00 556 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 APOA5Q6Q788 366 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 FAM126BQ8IXS8 530 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 FANCBQ8NB91 859 aa11.54□□□□□ -0.56
HLA-DQA1-206ENST00000482745 POLR3EQ9NVU0 708 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms