RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TXNP10599 105 aaKnown RBP23.98■■□□□ 1.43
SEC13-217ENST00000482647 COL6A1P12109 1028 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 GNA11P29992 359 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 TLK2Q86UE8 772 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 IL31RAQ8NI17 732 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 ZSCAN31Q96LW9 406 aaPredicted RBP23.98■■□□□ 1.43
SEC13-217ENST00000482647 ZMYND12Q9H0C1 365 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 EHMT1Q9H9B1 1298 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 PCDHA6Q9UN73 950 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 PCDHA8Q9Y5H6 950 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 MCM3APO60318 1980 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 ST18O60284 1047 aa23.97■■□□□ 1.43
SEC13-217ENST00000482647 LARGE1O95461 756 aa23.97■■□□□ 1.43
SEC13-217ENST00000482647 NKX3-2P78367 333 aa23.97■■□□□ 1.43
SEC13-217ENST00000482647 GNASQ5JWF2 1037 aa23.97■■□□□ 1.43
SEC13-217ENST00000482647 KLHDC9Q8NEP7 349 aa23.97■■□□□ 1.43
SEC13-217ENST00000482647 TSEN34Q9BSV6 310 aaKnown RBP23.97■■□□□ 1.43
SEC13-217ENST00000482647 SENP6Q9GZR1 1112 aaPredicted RBP23.97■■□□□ 1.43
SEC13-217ENST00000482647 CST5P28325 142 aaPredicted RBP23.96■■□□□ 1.43
SEC13-217ENST00000482647 TMEM63BQ5T3F8 832 aa23.96■■□□□ 1.43
SEC13-217ENST00000482647 PCNX4Q63HM2 1172 aa23.96■■□□□ 1.43
SEC13-217ENST00000482647 MCTP2Q6DN12 878 aa23.96■■□□□ 1.43
SEC13-217ENST00000482647 KCNV1Q6PIU1 500 aa23.96■■□□□ 1.43
SEC13-217ENST00000482647 FAM177A1Q8N128 213 aaPredicted RBP23.96■■□□□ 1.43
SEC13-217ENST00000482647 PCSK9Q8NBP7 692 aaKnown RBP23.96■■□□□ 1.43
SEC13-217ENST00000482647 BICD2Q8TD16 824 aa23.96■■□□□ 1.43
SEC13-217ENST00000482647 VPS54Q9P1Q0 977 aa23.96■■□□□ 1.43
SEC13-217ENST00000482647 PHF24Q9UPV7 400 aa23.96■■□□□ 1.43
SEC13-217ENST00000482647 STK36Q9NRP7 1315 aa23.95■■□□□ 1.42
SEC13-217ENST00000482647 CTDNEP1O95476 244 aa23.95■■□□□ 1.42
SEC13-217ENST00000482647 MRPS9P82933 396 aaKnown RBP23.95■■□□□ 1.42
SEC13-217ENST00000482647 AP3B2Q13367 1082 aa23.95■■□□□ 1.42
SEC13-217ENST00000482647 KCNA10Q16322 511 aa23.95■■□□□ 1.42
SEC13-217ENST00000482647 GNPTABQ3T906 1256 aa23.95■■□□□ 1.42
SEC13-217ENST00000482647 CCDC62Q6P9F0 684 aa23.95■■□□□ 1.42
SEC13-217ENST00000482647 WASF1Q92558 559 aa23.95■■□□□ 1.42
SEC13-217ENST00000482647 SH2B1Q9NRF2 756 aaPredicted RBP23.95■■□□□ 1.42
SEC13-217ENST00000482647 MRVI1Q9Y6F6 885 aa23.95■■□□□ 1.42
SEC13-217ENST00000482647 MYADML2A6NDP7 307 aa23.94■■□□□ 1.42
SEC13-217ENST00000482647 MOXD2PA6NHM9 499 aa23.94■■□□□ 1.42
SEC13-217ENST00000482647 ZEB2O60315 1214 aa23.94■■□□□ 1.42
SEC13-217ENST00000482647 RGS20O76081 388 aa23.94■■□□□ 1.42
SEC13-217ENST00000482647 ARIH2O95376 493 aa23.94■■□□□ 1.42
SEC13-217ENST00000482647 CLK2P49760 499 aaKnown RBP23.94■■□□□ 1.42
SEC13-217ENST00000482647 ACLYP53396 1101 aa23.94■■□□□ 1.42
SEC13-217ENST00000482647 NLRP5P59047 1200 aa23.94■■□□□ 1.42
SEC13-217ENST00000482647 FSCN1Q16658 493 aaKnown RBP23.94■■□□□ 1.42
SEC13-217ENST00000482647 CCSAPQ6IQ19 270 aaPredicted RBP23.94■■□□□ 1.42
SEC13-217ENST00000482647 DPF3Q92784 378 aa23.94■■□□□ 1.42
SEC13-217ENST00000482647 ORC3Q9UBD5 711 aaPredicted RBP23.94■■□□□ 1.42
SEC13-217ENST00000482647 DDX41Q9UJV9 622 aaKnown RBP23.94■■□□□ 1.42
SEC13-217ENST00000482647 TNRC18O15417 2968 aaPredicted RBP23.94■■□□□ 1.42
SEC13-217ENST00000482647 CTAGE5O15320 804 aa23.93■■□□□ 1.42
SEC13-217ENST00000482647 TGFB3P10600 412 aa23.93■■□□□ 1.42
SEC13-217ENST00000482647 PTGS1P23219 599 aa23.93■■□□□ 1.42
SEC13-217ENST00000482647 LY6KQ17RY6 165 aa23.93■■□□□ 1.42
SEC13-217ENST00000482647 BRDTQ58F21 947 aaPredicted RBP23.93■■□□□ 1.42
SEC13-217ENST00000482647 REXO1Q8N1G1 1221 aaKnown RBP23.93■■□□□ 1.42
SEC13-217ENST00000482647 OR6J1Q8NGC5 347 aa23.93■■□□□ 1.42
SEC13-217ENST00000482647 FERMT2Q96AC1 680 aa23.93■■□□□ 1.42
SEC13-217ENST00000482647 ZFP91Q96JP5 570 aaPredicted RBP23.93■■□□□ 1.42
SEC13-217ENST00000482647 TMEM260Q9NX78 707 aa23.93■■□□□ 1.42
SEC13-217ENST00000482647 RTEL1Q9NZ71 1219 aa23.93■■□□□ 1.42
SEC13-217ENST00000482647 XBP1P17861 261 aa23.92■■□□□ 1.42
SEC13-217ENST00000482647 CPT1AP50416 773 aa23.92■■□□□ 1.42
SEC13-217ENST00000482647 BEX3Q00994 111 aa23.92■■□□□ 1.42
SEC13-217ENST00000482647 JAKMIP3Q5VZ66 844 aa23.92■■□□□ 1.42
SEC13-217ENST00000482647 NLRX1Q86UT6 975 aa23.92■■□□□ 1.42
SEC13-217ENST00000482647 INPP4AQ96PE3 977 aaPredicted RBP23.92■■□□□ 1.42
SEC13-217ENST00000482647 ANO3Q9BYT9 981 aa23.92■■□□□ 1.42
SEC13-217ENST00000482647 DNAH12Q6ZR08 3092 aa23.91■■□□□ 1.42
SEC13-217ENST00000482647 GH1P01241 217 aa23.91■■□□□ 1.42
SEC13-217ENST00000482647 ASGR1P07306 291 aa23.91■■□□□ 1.42
SEC13-217ENST00000482647 IRX5P78411 483 aaPredicted RBP23.91■■□□□ 1.42
SEC13-217ENST00000482647 GALNT17Q6IS24 598 aa23.91■■□□□ 1.42
SEC13-217ENST00000482647 NSUN7Q8NE18 718 aaKnown RBP23.91■■□□□ 1.42
SEC13-217ENST00000482647 COPS5Q92905 334 aa23.91■■□□□ 1.42
SEC13-217ENST00000482647 PGBD1Q96JS3 809 aa23.91■■□□□ 1.42
SEC13-217ENST00000482647 AIFM3Q96NN9 605 aa23.91■■□□□ 1.42
SEC13-217ENST00000482647 PCDHA4Q9UN74 947 aa23.91■■□□□ 1.42
SEC13-217ENST00000482647 LRRC37A2A6NM11 1700 aa23.9■■□□□ 1.42
SEC13-217ENST00000482647 A0A1W2PQ45 241 aaPredicted RBP23.9■■□□□ 1.42
SEC13-217ENST00000482647 A0A1W2PQY0 241 aa23.9■■□□□ 1.42
SEC13-217ENST00000482647 SPATA31C2B4DYI2 1134 aa23.9■■□□□ 1.42
SEC13-217ENST00000482647 ICAM3P32942 547 aa23.9■■□□□ 1.42
SEC13-217ENST00000482647 MCM2P49736 904 aa23.9■■□□□ 1.42
SEC13-217ENST00000482647 LAMC2Q13753 1193 aa23.9■■□□□ 1.42
SEC13-217ENST00000482647 CCDC83Q8IWF9 413 aa23.9■■□□□ 1.42
SEC13-217ENST00000482647 GLT1D1Q96MS3 346 aa23.9■■□□□ 1.42
SEC13-217ENST00000482647 LLPHQ9BRT6 129 aaKnown RBP23.9■■□□□ 1.42
SEC13-217ENST00000482647 A6NJR5 290 aa23.89■■□□□ 1.41
SEC13-217ENST00000482647 FIBPO43427 364 aa23.89■■□□□ 1.41
SEC13-217ENST00000482647 EVI5O60447 810 aa23.89■■□□□ 1.41
SEC13-217ENST00000482647 DTNBO60941 627 aa23.89■■□□□ 1.41
SEC13-217ENST00000482647 CABYRO75952 493 aa23.89■■□□□ 1.41
SEC13-217ENST00000482647 FDPSP14324 419 aaKnown RBP23.89■■□□□ 1.41
SEC13-217ENST00000482647 SREBF1P36956 1147 aa23.89■■□□□ 1.41
SEC13-217ENST00000482647 ATN1P54259 1190 aaPredicted RBP23.89■■□□□ 1.41
SEC13-217ENST00000482647 DHX37Q8IY37 1157 aaKnown RBP23.89■■□□□ 1.41
SEC13-217ENST00000482647 CDHR1Q96JP9 859 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms