RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 PGRP06401 933 aa8.5□□□□□ -1.05
CLK1-212ENST00000482590 MED14OSP0DP75 135 aa8.5□□□□□ -1.05
CLK1-212ENST00000482590 ATG14Q6ZNE5 492 aa8.5□□□□□ -1.05
CLK1-212ENST00000482590 AMIGO3Q86WK7 504 aa8.5□□□□□ -1.05
CLK1-212ENST00000482590 CREG2Q8IUH2 290 aa8.5□□□□□ -1.05
CLK1-212ENST00000482590 DNAJB8Q8NHS0 232 aa8.5□□□□□ -1.05
CLK1-212ENST00000482590 DHX38Q92620 1227 aaKnown RBP8.5□□□□□ -1.05
CLK1-212ENST00000482590 TMEM87BQ96K49 555 aa8.5□□□□□ -1.05
CLK1-212ENST00000482590 BRINP2Q9C0B6 783 aa8.5□□□□□ -1.05
CLK1-212ENST00000482590 DUSP15Q9H1R2 295 aaPredicted RBP8.5□□□□□ -1.05
CLK1-212ENST00000482590 BRCA1P38398 1863 aaKnown RBP8.49□□□□□ -1.05
CLK1-212ENST00000482590 ETV2O00321 342 aaPredicted RBP8.49□□□□□ -1.05
CLK1-212ENST00000482590 ATP2B1P20020 1258 aa8.49□□□□□ -1.05
CLK1-212ENST00000482590 EIF4BP23588 611 aaKnown RBP8.49□□□□□ -1.05
CLK1-212ENST00000482590 GNA15P30679 374 aa8.49□□□□□ -1.05
CLK1-212ENST00000482590 KCNA10Q16322 511 aa8.49□□□□□ -1.05
CLK1-212ENST00000482590 GAB4Q2WGN9 574 aa8.49□□□□□ -1.05
CLK1-212ENST00000482590 C9orf131Q5VYM1 1079 aa8.49□□□□□ -1.05
CLK1-212ENST00000482590 SLC6A19Q695T7 634 aa8.49□□□□□ -1.05
CLK1-212ENST00000482590 AGMOQ6ZNB7 445 aa8.49□□□□□ -1.05
CLK1-212ENST00000482590 COL23A1Q86Y22 540 aaPredicted RBP8.49□□□□□ -1.05
CLK1-212ENST00000482590 NLGN2Q8NFZ4 835 aa8.49□□□□□ -1.05
CLK1-212ENST00000482590 SMARCC1Q92922 1105 aaPredicted RBP8.49□□□□□ -1.05
CLK1-212ENST00000482590 KIAA1551Q9HCM1 1747 aa8.49□□□□□ -1.05
CLK1-212ENST00000482590 CYP27B1O15528 508 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 LMNB1P20700 586 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 ETV3P41162 512 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 LDLRAD1Q5T700 205 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 TTLL10Q6ZVT0 673 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 TEX2Q8IWB9 1127 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 MORC4Q8TE76 937 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 SP110Q9HB58 689 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 TJP1Q07157 1748 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
CLK1-212ENST00000482590 ARFGEF1Q9Y6D6 1849 aa8.47□□□□□ -1.05
CLK1-212ENST00000482590 CICQ96RK0 1608 aaPredicted RBP8.47□□□□□ -1.05
CLK1-212ENST00000482590 GRIN3BO60391 1043 aa8.47□□□□□ -1.05
CLK1-212ENST00000482590 GLDCP23378 1020 aa8.47□□□□□ -1.05
CLK1-212ENST00000482590 TPP2P29144 1249 aaPredicted RBP8.47□□□□□ -1.05
CLK1-212ENST00000482590 TRHRP34981 398 aaPredicted RBP8.47□□□□□ -1.05
CLK1-212ENST00000482590 LIG3P49916 1009 aa8.47□□□□□ -1.05
CLK1-212ENST00000482590 MAP3K11Q16584 847 aa8.47□□□□□ -1.05
CLK1-212ENST00000482590 MCATQ8IVS2 390 aaKnown RBP8.47□□□□□ -1.05
CLK1-212ENST00000482590 NLGN1Q8N2Q7 840 aa8.47□□□□□ -1.05
CLK1-212ENST00000482590 MYH14Q7Z406 1995 aaKnown RBP8.47□□□□□ -1.05
CLK1-212ENST00000482590 WASHC2AQ641Q2 1341 aa8.47□□□□□ -1.05
CLK1-212ENST00000482590 CLSPNQ9HAW4 1339 aa8.47□□□□□ -1.05
CLK1-212ENST00000482590 TCAF2A6NFQ2 919 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 PARNO95453 639 aaKnown RBP8.46□□□□□ -1.06
CLK1-212ENST00000482590 IBSPP21815 317 aaPredicted RBP8.46□□□□□ -1.06
CLK1-212ENST00000482590 EAPPQ56P03 285 aaPredicted RBP8.46□□□□□ -1.06
CLK1-212ENST00000482590 HSP90AB4PQ58FF6 505 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 METTL16Q86W50 562 aaKnown RBP8.46□□□□□ -1.06
CLK1-212ENST00000482590 IFNL2Q8IZJ0 200 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 PPP1R13LQ8WUF5 828 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 ACSF2Q96CM8 615 aaPredicted RBP8.46□□□□□ -1.06
CLK1-212ENST00000482590 RNF32Q9H0A6 362 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 MIR1-1HGQ9H1L0 117 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 PIF1Q9H611 641 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 RNF19AQ9NV58 838 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 TMOD3Q9NYL9 352 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 CEP131Q9UPN4 1083 aa8.46□□□□□ -1.06
CLK1-212ENST00000482590 SMG5Q9UPR3 1016 aaKnown RBP8.46□□□□□ -1.06
CLK1-212ENST00000482590 NOP58Q9Y2X3 529 aaKnown RBP8.46□□□□□ -1.06
CLK1-212ENST00000482590 MAP4K4O95819 1239 aaPredicted RBP8.45□□□□□ -1.06
CLK1-212ENST00000482590 SRFP11831 508 aa8.45□□□□□ -1.06
CLK1-212ENST00000482590 TFE3P19532 575 aaPredicted RBP8.45□□□□□ -1.06
CLK1-212ENST00000482590 GTF2F1P35269 517 aaKnown RBP eCLIP8.45□□□□□ -1.06
CLK1-212ENST00000482590 C1QTNF8P60827 252 aa8.45□□□□□ -1.06
CLK1-212ENST00000482590 KCNN1Q92952 543 aa8.45□□□□□ -1.06
CLK1-212ENST00000482590 TRIT1Q9H3H1 467 aaKnown RBP8.45□□□□□ -1.06
CLK1-212ENST00000482590 AK5Q9Y6K8 562 aa8.45□□□□□ -1.06
CLK1-212ENST00000482590 ATP10DQ9P241 1426 aa8.45□□□□□ -1.06
CLK1-212ENST00000482590 TNNT2P45379 298 aaPredicted RBP8.44□□□□□ -1.06
CLK1-212ENST00000482590 ANAPC15P60006 121 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 PDE4BQ07343 736 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 RBL2Q08999 1139 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 TCEAL1Q15170 157 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 CIAPIN1Q6FI81 312 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 SMC5Q8IY18 1101 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 PIGBQ92521 554 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 GMLQ99445 158 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 PCGF6Q9BYE7 350 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 GPR62Q9BZJ7 368 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 TGIF2Q9GZN2 237 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 RAPGEFL1Q9UHV5 662 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 ADAM30Q9UKF2 790 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 CD2APQ9Y5K6 639 aa8.44□□□□□ -1.06
CLK1-212ENST00000482590 AFDNP55196 1824 aaKnown RBP8.43□□□□□ -1.06
CLK1-212ENST00000482590 PRPF40AO75400 957 aaKnown RBP8.43□□□□□ -1.06
CLK1-212ENST00000482590 PHKG2P15735 406 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 LINC00310P59036 64 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 RPL6Q02878 288 aaKnown RBP8.43□□□□□ -1.06
CLK1-212ENST00000482590 EGR3Q06889 387 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 EIF4A2Q14240 407 aaKnown RBP8.43□□□□□ -1.06
CLK1-212ENST00000482590 NT5DC4Q86YG4 428 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 DTWD2Q8NBA8 298 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 LINC00116Q8NCU8 138 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 POLKQ9UBT6 870 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 DUSP13Q9UII6 198 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms