RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 SH3D19Q5HYK7 790 aa24.81■■□□□ 1.56
RUNX1-216ENST00000482318 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.81■■□□□ 1.56
RUNX1-216ENST00000482318 ENOX1Q8TC92 643 aaKnown RBP24.81■■□□□ 1.56
RUNX1-216ENST00000482318 LENG9Q96B70 501 aa24.81■■□□□ 1.56
RUNX1-216ENST00000482318 LRRC27Q9C0I9 530 aa24.81■■□□□ 1.56
RUNX1-216ENST00000482318 RAVER2Q9HCJ3 691 aaKnown RBP24.81■■□□□ 1.56
RUNX1-216ENST00000482318 COL11A1P12107 1806 aaPredicted RBP24.81■■□□□ 1.56
RUNX1-216ENST00000482318 PTPRFP10586 1907 aa24.81■■□□□ 1.56
RUNX1-216ENST00000482318 ZNF658Q5TYW1 1059 aaPredicted RBP24.81■■□□□ 1.56
RUNX1-216ENST00000482318 SV2BQ7L1I2 683 aa24.81■■□□□ 1.56
RUNX1-216ENST00000482318 CLEC4DQ8WXI8 215 aa24.81■■□□□ 1.56
RUNX1-216ENST00000482318 MYPNQ86TC9 1320 aa24.8■■□□□ 1.56
RUNX1-216ENST00000482318 COG2Q14746 738 aa24.8■■□□□ 1.56
RUNX1-216ENST00000482318 TMEM119Q4V9L6 283 aa24.8■■□□□ 1.56
RUNX1-216ENST00000482318 HYIQ5T013 277 aa24.8■■□□□ 1.56
RUNX1-216ENST00000482318 HAUS3Q68CZ6 603 aa24.8■■□□□ 1.56
RUNX1-216ENST00000482318 ERMNQ8TAM6 284 aa24.8■■□□□ 1.56
RUNX1-216ENST00000482318 C7orf25Q9BPX7 421 aa24.8■■□□□ 1.56
RUNX1-216ENST00000482318 ESPNB1AK53 854 aa24.79■■□□□ 1.56
RUNX1-216ENST00000482318 DSG3P32926 999 aa24.79■■□□□ 1.56
RUNX1-216ENST00000482318 ZSCAN30Q86W11 494 aa24.79■■□□□ 1.56
RUNX1-216ENST00000482318 DRC7Q8IY82 874 aa24.79■■□□□ 1.56
RUNX1-216ENST00000482318 LARP4BQ92615 738 aaKnown RBP24.79■■□□□ 1.56
RUNX1-216ENST00000482318 ATG4CQ96DT6 458 aa24.79■■□□□ 1.56
RUNX1-216ENST00000482318 PNMA5Q96PV4 448 aa24.79■■□□□ 1.56
RUNX1-216ENST00000482318 SETQ01105 290 aaPredicted RBP24.78■■□□□ 1.56
RUNX1-216ENST00000482318 CATSPERGQ6ZRH7 1159 aa24.78■■□□□ 1.56
RUNX1-216ENST00000482318 TRIM9Q9C026 710 aa24.78■■□□□ 1.56
RUNX1-216ENST00000482318 ADAMTS5Q9UNA0 930 aa24.78■■□□□ 1.56
RUNX1-216ENST00000482318 IGLV3-22A0A075B6J6 115 aa24.78■■□□□ 1.56
RUNX1-216ENST00000482318 NFIBO00712 420 aa24.78■■□□□ 1.56
RUNX1-216ENST00000482318 MSH4O15457 936 aa24.78■■□□□ 1.56
RUNX1-216ENST00000482318 CCT6AP40227 531 aaKnown RBP24.78■■□□□ 1.56
RUNX1-216ENST00000482318 LRRC15Q8TF66 581 aa24.78■■□□□ 1.56
RUNX1-216ENST00000482318 RAD54LQ92698 747 aa24.78■■□□□ 1.56
RUNX1-216ENST00000482318 CDCA5Q96FF9 252 aa24.78■■□□□ 1.56
RUNX1-216ENST00000482318 RHOBTB3O94955 611 aa24.77■■□□□ 1.56
RUNX1-216ENST00000482318 CEP55Q53EZ4 464 aa24.77■■□□□ 1.56
RUNX1-216ENST00000482318 GJA10Q969M2 543 aa24.77■■□□□ 1.56
RUNX1-216ENST00000482318 BLOC1S4Q9NUP1 217 aa24.77■■□□□ 1.56
RUNX1-216ENST00000482318 HOXC10Q9NYD6 342 aa24.77■■□□□ 1.56
RUNX1-216ENST00000482318 SYNRGQ9UMZ2 1314 aa24.77■■□□□ 1.56
RUNX1-216ENST00000482318 PNMA8AQ86V59 439 aaPredicted RBP24.76■■□□□ 1.55
RUNX1-216ENST00000482318 ANKRD13AQ8IZ07 590 aa24.76■■□□□ 1.55
RUNX1-216ENST00000482318 FAM43AQ8N2R8 423 aa24.76■■□□□ 1.55
RUNX1-216ENST00000482318 TRERF1Q96PN7 1200 aa24.76■■□□□ 1.55
RUNX1-216ENST00000482318 NFE2L3Q9Y4A8 694 aa24.76■■□□□ 1.55
RUNX1-216ENST00000482318 RPTORQ8N122 1335 aa24.76■■□□□ 1.55
RUNX1-216ENST00000482318 PPP1R3GB7ZBB8 358 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 ATP2A1O14983 1001 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 FMR1Q06787 632 aaKnown RBP eCLIP24.75■■□□□ 1.558e-8■■■■■ 28.6
RUNX1-216ENST00000482318 SPIRE1Q08AE8 756 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 SPC24Q8NBT2 197 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 MAF1Q9H063 256 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 HSD3B7Q9H2F3 369 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 TAF1DQ9H5J8 278 aaPredicted RBP24.75■■□□□ 1.55
RUNX1-216ENST00000482318 HOMER2Q9NSB8 354 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 FANCLQ9NW38 375 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 LOC285556D6RIA3 1793 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 CBFA2T2O43439 604 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 KLRC4O43908 158 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 MSNP26038 577 aaKnown RBP24.75■■□□□ 1.55
RUNX1-216ENST00000482318 HOXA7P31268 230 aaPredicted RBP24.75■■□□□ 1.55
RUNX1-216ENST00000482318 ASIC1P78348 528 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 PPATQ06203 517 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 STIM1Q13586 685 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 KMT5BQ4FZB7 885 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 MUM1L1Q5H9M0 696 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 REPS2Q8NFH8 660 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 NUDT12Q9BQG2 462 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 EXOC1Q9NV70 894 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 ZKSCAN5Q9Y2L8 839 aa24.75■■□□□ 1.55
RUNX1-216ENST00000482318 CD44P16070 742 aaKnown RBP24.74■■□□□ 1.55
RUNX1-216ENST00000482318 PPP1R2P41236 205 aa24.74■■□□□ 1.55
RUNX1-216ENST00000482318 FANCCQ00597 558 aa24.74■■□□□ 1.55
RUNX1-216ENST00000482318 TKFCQ3LXA3 575 aa24.74■■□□□ 1.55
RUNX1-216ENST00000482318 SPATA1Q5VX52 437 aa24.74■■□□□ 1.55
RUNX1-216ENST00000482318 CNNM4Q6P4Q7 775 aa24.74■■□□□ 1.55
RUNX1-216ENST00000482318 DLK2Q6UY11 383 aa24.74■■□□□ 1.55
RUNX1-216ENST00000482318 KCTD17Q8N5Z5 321 aa24.74■■□□□ 1.55
RUNX1-216ENST00000482318 CYP2W1Q8TAV3 490 aa24.74■■□□□ 1.55
RUNX1-216ENST00000482318 MCM6Q14566 821 aa24.73■■□□□ 1.55
RUNX1-216ENST00000482318 NCAPH2Q6IBW4 605 aa24.73■■□□□ 1.55
RUNX1-216ENST00000482318 KLHL10Q6JEL2 608 aa24.73■■□□□ 1.55
RUNX1-216ENST00000482318 RNF207Q6ZRF8 634 aa24.73■■□□□ 1.55
RUNX1-216ENST00000482318 NIPA1Q7RTP0 329 aa24.73■■□□□ 1.55
RUNX1-216ENST00000482318 ERO1BQ86YB8 467 aa24.73■■□□□ 1.55
RUNX1-216ENST00000482318 SYTL5Q8TDW5 730 aaPredicted RBP24.73■■□□□ 1.55
RUNX1-216ENST00000482318 RNF146Q9NTX7 359 aa24.73■■□□□ 1.55
RUNX1-216ENST00000482318 VAV3Q9UKW4 847 aa24.73■■□□□ 1.55
RUNX1-216ENST00000482318 FRMPD4Q14CM0 1322 aa24.73■■□□□ 1.55
RUNX1-216ENST00000482318 PVALEFA0A1B0GWK0 134 aa24.72■■□□□ 1.55
RUNX1-216ENST00000482318 MEIS1O00470 390 aa24.72■■□□□ 1.55
RUNX1-216ENST00000482318 SERPINC1P01008 464 aa24.72■■□□□ 1.55
RUNX1-216ENST00000482318 RPS6P62753 249 aaKnown RBP24.72■■□□□ 1.55
RUNX1-216ENST00000482318 UBXN2AP68543 259 aa24.72■■□□□ 1.55
RUNX1-216ENST00000482318 PAK1Q13153 545 aa24.72■■□□□ 1.55
RUNX1-216ENST00000482318 TTLL12Q14166 644 aaPredicted RBP24.72■■□□□ 1.55
RUNX1-216ENST00000482318 EAPPQ56P03 285 aaPredicted RBP24.72■■□□□ 1.55
RUNX1-216ENST00000482318 SNRNP48Q6IEG0 339 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms