RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 RBAK-RBAKDNI3L0D1 243 aa20.4■□□□□ 0.86
RXRB-203ENST00000481441 GH1P01241 217 aa20.4■□□□□ 0.86
RXRB-203ENST00000481441 ZNF543Q08ER8 600 aa20.4■□□□□ 0.86
RXRB-203ENST00000481441 TRAF7Q6Q0C0 670 aa20.4■□□□□ 0.86
RXRB-203ENST00000481441 RGS22Q8NE09 1264 aa20.4■□□□□ 0.86
RXRB-203ENST00000481441 EFCAB14O75071 495 aa20.39■□□□□ 0.85
RXRB-203ENST00000481441 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
RXRB-203ENST00000481441 IKBKEQ14164 716 aa20.39■□□□□ 0.85
RXRB-203ENST00000481441 LY6KQ17RY6 165 aa20.39■□□□□ 0.85
RXRB-203ENST00000481441 PTCRAQ6ISU1 281 aaPredicted RBP20.39■□□□□ 0.85
RXRB-203ENST00000481441 FAM117BQ6P1L5 589 aa20.39■□□□□ 0.85
RXRB-203ENST00000481441 OTUD7AQ8TE49 926 aaPredicted RBP20.39■□□□□ 0.85
RXRB-203ENST00000481441 HDAC6Q9UBN7 1215 aa20.39■□□□□ 0.85
RXRB-203ENST00000481441 MICAL3Q7RTP6 2002 aa20.39■□□□□ 0.85
RXRB-203ENST00000481441 GRXCR2A6NFK2 248 aa20.38■□□□□ 0.85
RXRB-203ENST00000481441 SNHG28P0DPA3 235 aa20.38■□□□□ 0.85
RXRB-203ENST00000481441 ALADP13716 330 aa20.38■□□□□ 0.85
RXRB-203ENST00000481441 SSTR3P32745 418 aaPredicted RBP20.38■□□□□ 0.85
RXRB-203ENST00000481441 MBTPS1Q14703 1052 aa20.38■□□□□ 0.85
RXRB-203ENST00000481441 ALX1Q15699 326 aa20.38■□□□□ 0.85
RXRB-203ENST00000481441 TRIM71Q2Q1W2 868 aaKnown RBP20.38■□□□□ 0.85
RXRB-203ENST00000481441 SEPT14Q6ZU15 432 aa20.38■□□□□ 0.85
RXRB-203ENST00000481441 C17orf80Q9BSJ5 609 aa20.38■□□□□ 0.85
RXRB-203ENST00000481441 TOMM22Q9NS69 142 aa20.38■□□□□ 0.85
RXRB-203ENST00000481441 MYH7BA7E2Y1 1941 aa20.38■□□□□ 0.85
RXRB-203ENST00000481441 PTK7Q13308 1070 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 MKRN4PQ13434 485 aaPredicted RBP20.37■□□□□ 0.85
RXRB-203ENST00000481441 DGKDQ16760 1214 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 USH1GQ495M9 461 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 RRP12Q5JTH9 1297 aaKnown RBP20.37■□□□□ 0.85
RXRB-203ENST00000481441 CHST3Q7LGC8 479 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 C7orf31Q8N865 590 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 FBXO22Q8NEZ5 403 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 NEK9Q8TD19 979 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 TBC1D5Q92609 795 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 WNT8BQ93098 351 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 CRBNQ96SW2 442 aa20.37■□□□□ 0.85
RXRB-203ENST00000481441 PSEN2P49810 448 aa20.36■□□□□ 0.85
RXRB-203ENST00000481441 ZNF618Q5T7W0 954 aa20.36■□□□□ 0.85
RXRB-203ENST00000481441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.36■□□□□ 0.85
RXRB-203ENST00000481441 MRPL38Q96DV4 380 aaKnown RBP20.36■□□□□ 0.85
RXRB-203ENST00000481441 TAAR1Q96RJ0 339 aa20.36■□□□□ 0.85
RXRB-203ENST00000481441 ALG1Q9BT22 464 aa20.36■□□□□ 0.85
RXRB-203ENST00000481441 MAF1Q9H063 256 aa20.36■□□□□ 0.85
RXRB-203ENST00000481441 COL20A1Q9P218 1284 aa20.36■□□□□ 0.85
RXRB-203ENST00000481441 RCAN3Q9UKA8 241 aa20.36■□□□□ 0.85
RXRB-203ENST00000481441 INSL6Q9Y581 213 aa20.36■□□□□ 0.85
RXRB-203ENST00000481441 HAS3O00219 553 aa20.35■□□□□ 0.85
RXRB-203ENST00000481441 LGR5O75473 907 aa20.35■□□□□ 0.85
RXRB-203ENST00000481441 F2P00734 622 aa20.35■□□□□ 0.85
RXRB-203ENST00000481441 HTRA4P83105 476 aaPredicted RBP20.35■□□□□ 0.85
RXRB-203ENST00000481441 PUS10Q3MIT2 529 aaKnown RBP20.35■□□□□ 0.85
RXRB-203ENST00000481441 SP7Q8TDD2 431 aaPredicted RBP20.35■□□□□ 0.85
RXRB-203ENST00000481441 SYTL5Q8TDW5 730 aaPredicted RBP20.35■□□□□ 0.85
RXRB-203ENST00000481441 NSUN6Q8TEA1 469 aaKnown RBP20.35■□□□□ 0.85
RXRB-203ENST00000481441 EMID1Q96A84 441 aaPredicted RBP20.35■□□□□ 0.85
RXRB-203ENST00000481441 TTC14Q96N46 770 aa20.35■□□□□ 0.85
RXRB-203ENST00000481441 UIMC1Q96RL1 719 aa20.35■□□□□ 0.85
RXRB-203ENST00000481441 KATNAL1Q9BW62 490 aa20.35■□□□□ 0.85
RXRB-203ENST00000481441 DDX41Q9UJV9 622 aaKnown RBP20.35■□□□□ 0.85
RXRB-203ENST00000481441 FGAP02671 866 aa20.34■□□□□ 0.85
RXRB-203ENST00000481441 MRE11P49959 708 aa20.34■□□□□ 0.85
RXRB-203ENST00000481441 MFSD10Q14728 455 aa20.34■□□□□ 0.85
RXRB-203ENST00000481441 STXBP2Q15833 593 aa20.34■□□□□ 0.85
RXRB-203ENST00000481441 KIAA0753Q2KHM9 967 aa20.34■□□□□ 0.85
RXRB-203ENST00000481441 IWS1Q96ST2 819 aa20.34■□□□□ 0.85
RXRB-203ENST00000481441 POTEB3A0JP26 581 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 H3BQ06 376 aaPredicted RBP20.33■□□□□ 0.85
RXRB-203ENST00000481441 ZNF286BP0CG31 522 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 GOLGA8HP0CJ92 632 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 MX1P20591 662 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 ZNF200P98182 395 aaPredicted RBP20.33■□□□□ 0.85
RXRB-203ENST00000481441 CSPP1Q1MSJ5 1256 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 POTEBQ6S5H4 581 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 CPVLQ9H3G5 476 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 CTNNA3Q9UI47 895 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 MYH6P13533 1939 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 ZNF318Q5VUA4 2279 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 NLRC5Q86WI3 1866 aa20.33■□□□□ 0.85
RXRB-203ENST00000481441 EMSYQ7Z589 1322 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 DCXO43602 365 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 AMHP03971 560 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 NHLH1Q02575 133 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 HIC1Q14526 733 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 COL19A1Q14993 1142 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 EPC2Q52LR7 807 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 GPATCH4Q5T3I0 446 aaKnown RBP20.32■□□□□ 0.84
RXRB-203ENST00000481441 DBF4BQ8NFT6 615 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 PPTC7Q8NI37 304 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 RMDN3Q96TC7 470 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 UBA5Q9GZZ9 404 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 HELLSQ9NRZ9 838 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 MYO7AQ13402 2215 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 ABCB11O95342 1321 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 SALL3Q9BXA9 1300 aa20.32■□□□□ 0.84
RXRB-203ENST00000481441 HOXD8P13378 290 aaPredicted RBP20.31■□□□□ 0.84
RXRB-203ENST00000481441 LAMC2Q13753 1193 aa20.31■□□□□ 0.84
RXRB-203ENST00000481441 CDC37Q16543 378 aaPredicted RBP20.31■□□□□ 0.84
RXRB-203ENST00000481441 PTPROQ16827 1216 aa20.31■□□□□ 0.84
RXRB-203ENST00000481441 TIGD5Q53EQ6 642 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms