RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ARL4AP40617 200 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 CYP4F8P98187 520 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 KCNAB2Q13303 367 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 PLEKHG4Q58EX7 1191 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 SLC35F1Q5T1Q4 408 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 ACBD5Q5T8D3 534 aaPredicted RBP5.53□□□□□ -1.52
CBX3-207ENST00000481300 TMEFF1Q8IYR6 380 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 MARCH10Q8NA82 808 aaPredicted RBP5.53□□□□□ -1.52
CBX3-207ENST00000481300 NPLOC4Q8TAT6 608 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 FRS2Q8WU20 508 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 MZB1Q8WU39 189 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 DIO2Q92813 273 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 C1orf159Q96HA4 380 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 ZCCHC4Q9H5U6 513 aa5.53□□□□□ -1.52
CBX3-207ENST00000481300 NCOA5Q9HCD5 579 aaKnown RBP5.53□□□□□ -1.52
CBX3-207ENST00000481300 A0A0G2JLL6 359 aaPredicted RBP5.52□□□□□ -1.53
CBX3-207ENST00000481300 A0A1W2PQ27 194 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 A0A1W2PQ64 194 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 A0A1W2PQC6 194 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 A0A1W2PQD8 194 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 BLACEA4D250 179 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 NUDT19A8MXV4 375 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 ABLIM1O14639 778 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 PLD2O14939 933 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 PPP1R12AO14974 1030 aaPredicted RBP5.52□□□□□ -1.53
CBX3-207ENST00000481300 MSL3P1P0C860 447 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 LTBRP36941 435 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 GABREP78334 506 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 RBM10P98175 930 aaKnown RBP5.52□□□□□ -1.53
CBX3-207ENST00000481300 MVKQ03426 396 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 CBX2Q14781 532 aaPredicted RBP5.52□□□□□ -1.53
CBX3-207ENST00000481300 RAB3GAP1Q15042 981 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 RPTNQ6XPR3 784 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 TMC6Q7Z403 805 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 LDHDQ86WU2 507 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 IGDCC3Q8IVU1 814 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 TMEM151BQ8IW70 566 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 KREMEN2Q8NCW0 462 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 DCAF4Q8WV16 495 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 PTPRN2Q92932 1015 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 MRPL4Q9BYD3 311 aaKnown RBP5.52□□□□□ -1.53
CBX3-207ENST00000481300 NDOR1Q9UHB4 597 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 SFMBT1Q9UHJ3 866 aa5.52□□□□□ -1.53
CBX3-207ENST00000481300 MYO1BO43795 1136 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 EFCAB14O75071 495 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 RAPGEF3O95398 923 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 BUD31P41223 144 aaPredicted RBP5.51□□□□□ -1.53
CBX3-207ENST00000481300 AFF3P51826 1226 aaKnown RBP5.51□□□□□ -1.53
CBX3-207ENST00000481300 CYP4F3Q08477 520 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 EGFLAMQ63HQ2 1017 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 OLFML2BQ68BL8 750 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 MAMDC2Q7Z304 686 aaPredicted RBP5.51□□□□□ -1.53
CBX3-207ENST00000481300 CPNE8Q86YQ8 564 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 MMP19Q99542 508 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 PHF20Q9BVI0 1012 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 PCDHA5Q9Y5H7 936 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 CD2APQ9Y5K6 639 aa5.51□□□□□ -1.53
CBX3-207ENST00000481300 AQP7O14520 342 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 NPHS1O60500 1241 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 NAT1P18440 290 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 NTRK3Q16288 839 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 TKFCQ3LXA3 575 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 PLEKHN1Q494U1 663 aaPredicted RBP5.5□□□□□ -1.53
CBX3-207ENST00000481300 FNDC3BQ53EP0 1204 aaKnown RBP5.5□□□□□ -1.53
CBX3-207ENST00000481300 DENND5AQ6IQ26 1287 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 STYK1Q6J9G0 422 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 RSPO2Q6UXX9 243 aaPredicted RBP5.5□□□□□ -1.53
CBX3-207ENST00000481300 KIAA0907Q7Z7F0 614 aaPredicted RBP5.5□□□□□ -1.53
CBX3-207ENST00000481300 MTDHQ86UE4 582 aaKnown RBP5.5□□□□□ -1.53
CBX3-207ENST00000481300 FAM129CQ86XR2 697 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 XYLT2Q9H1B5 865 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 GPR27Q9NS67 375 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 TMEFF2Q9UIK5 374 aaPredicted RBP5.5□□□□□ -1.53
CBX3-207ENST00000481300 PLAAQ9Y263 795 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 ADAMTS20P59510 1910 aa5.5□□□□□ -1.53
CBX3-207ENST00000481300 C6orf222P0C671 652 aaPredicted RBP5.49□□□□□ -1.53
CBX3-207ENST00000481300 NCKAP1LP55160 1127 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 TMEM62Q0P6H9 643 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 PABPC4Q13310 644 aaKnown RBP eCLIP5.49□□□□□ -1.53
CBX3-207ENST00000481300 TESK1Q15569 626 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 C21orf62-AS1Q17RA5 79 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 VMACQ2NL98 169 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 KCNT2Q6UVM3 1135 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 CCDC103Q8IW40 242 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 IFNL3Q8IZI9 196 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 CHAMP1Q96JM3 812 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 ZFYVE21Q9BQ24 234 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 SLC52A2Q9HAB3 445 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.49□□□□□ -1.53
CBX3-207ENST00000481300 TRAF6Q9Y4K3 522 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 PCDHA2Q9Y5H9 948 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 NPFFR2Q9Y5X5 522 aa5.49□□□□□ -1.53
CBX3-207ENST00000481300 A0A1W2PQJ5 194 aa5.48□□□□□ -1.53
CBX3-207ENST00000481300 C7orf72A4D263 438 aa5.48□□□□□ -1.53
CBX3-207ENST00000481300 RFPL3O75679 317 aa5.48□□□□□ -1.53
CBX3-207ENST00000481300 MAPKAPK2P49137 400 aa5.48□□□□□ -1.53
CBX3-207ENST00000481300 GTF2A2P52657 109 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms