RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 ACTN1P12814 892 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 KCTD2Q14681 263 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 CCDC17Q96LX7 622 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 ZBTB18Q99592 522 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 FOXP1Q9H334 677 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 TPX2Q9ULW0 747 aaKnown RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 ALS2CLQ60I27 953 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 RAPH1Q70E73 1250 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 PDCD7Q8N8D1 485 aaKnown RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 RNF169Q8NCN4 708 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 AP5M1Q9H0R1 490 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 RGS12O14924 1447 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 EPHB4P54760 987 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 IGBP1P78318 339 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 SLMAPQ14BN4 828 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 TAF11Q15544 211 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 GSDMAQ96QA5 445 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 LRRC37BQ96QE4 947 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 MRPL40Q9NQ50 206 aaKnown RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 ETF1P62495 437 aaKnown RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 ADKP55263 362 aaKnown RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 FGD4Q96M96 766 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 NUDCD1Q96RS6 583 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 AMNQ9BXJ7 453 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 KDM5CP41229 1560 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 KLRF2D3W0D1 207 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 TRMT44Q8IYL2 757 aaKnown RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 TMEM206Q9H813 350 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 SCINQ9Y6U3 715 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 ARL4AP40617 200 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 RYBPQ8N488 228 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 DCPSQ96C86 337 aaKnown RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 TBX22Q9Y458 520 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 RP1P56715 2156 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 ATG16L1Q676U5 607 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 TMED8Q6PL24 325 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 ACCSQ96QU6 501 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 EPN1Q9Y6I3 576 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 SAT1P21673 171 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 VPS41P49754 854 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 NACC1Q96RE7 527 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 SUCLA2Q9P2R7 463 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 COPB1P53618 953 aaKnown RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 RASIP1Q5U651 963 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 PDXDC1Q6P996 788 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 GDAP1L1Q96MZ0 367 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 SUGCTQ9HAC7 445 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 ZNF215Q9UL58 517 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 EIF3DO15371 548 aaKnown RBP eCLIP10.33□□□□□ -0.76
VEGFA-212ENST00000480614 MSH2P43246 934 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 MIS18BP1Q6P0N0 1132 aa10.33□□□□□ -0.76
VEGFA-212ENST00000480614 TMCC1O94876 653 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 SKIP12755 728 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 ANXA13P27216 316 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 USP14P54578 494 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 ABCB5Q2M3G0 1257 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 SULF1Q8IWU6 871 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 SMYD2Q9NRG4 433 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 GCNT4Q9P109 453 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 EHHADHQ08426 723 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 TSTA3Q13630 321 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 ODR4Q5SWX8 454 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 TTBK2Q6IQ55 1244 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 INTS9Q9NV88 658 aaKnown RBP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 MAPK4P31152 587 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 DPY19L2Q6NUT2 758 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 MAGOHBQ96A72 148 aaKnown RBP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 ZNF594Q96JF6 807 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 GIPC2Q8TF65 315 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 SERTAD1Q9UHV2 236 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 JAK2O60674 1132 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 DDX5P17844 614 aaKnown RBP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 MX2P20592 715 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 CASP2P42575 452 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 IFRD2Q12894 506 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 SPDYE1Q8NFV5 336 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 CHMP6Q96FZ7 201 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 LMBRD1Q9NUN5 540 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 SCHIP1Q9P0W5 487 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 TLK1Q9UKI8 766 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 ECEL1O95672 775 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 PAMP19021 973 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 DAAM1Q9Y4D1 1078 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 CIAO1O76071 339 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 LMNAP02545 664 aaKnown RBP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 SCOCQ9UIL1 159 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 IL13P35225 146 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 RCN2Q14257 317 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.32□□□□□ -0.76
VEGFA-212ENST00000480614 GADL1Q6ZQY3 521 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 RPAINQ86UA6 219 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 OSBPP22059 807 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 SLFN13Q68D06 897 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 DNAJC24Q6P3W2 148 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 PPP4R3CPQ6ZMV5 832 aa10.32□□□□□ -0.76
VEGFA-212ENST00000480614 PFDN1O60925 122 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 PSMD2Q13200 908 aa10.31□□□□□ -0.76
VEGFA-212ENST00000480614 UBN1Q9NPG3 1134 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms