RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 JAG2Q9Y219 1238 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 GDAQ9Y2T3 454 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 TARSL2A2RTX5 802 aaKnown RBP11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PPP1R3GB7ZBB8 358 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PDGFRBP09619 1106 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 SLC5A1P13866 664 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PMS1P54277 932 aaKnown RBP11.24□□□□□ -0.61
COMMD4-203ENST00000480484 IFNL3Q8IZI9 196 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PCDHB13Q9Y5F0 798 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 SRPRBQ9Y5M8 271 aaKnown RBP11.24□□□□□ -0.61
COMMD4-203ENST00000480484 TAF1P21675 1872 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 TTC26A0AVF1 554 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 UQCRFS1P1P0C7P4 283 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PTF1AQ7RTS3 328 aa11.24□□□□□ -0.61
COMMD4-203ENST00000480484 ELOA2Q8IYF1 753 aaPredicted RBP11.24□□□□□ -0.61
COMMD4-203ENST00000480484 PRPF38AQ8NAV1 312 aaKnown RBP11.24□□□□□ -0.61
COMMD4-203ENST00000480484 SYMPKQ92797 1274 aaKnown RBP11.24□□□□□ -0.61
COMMD4-203ENST00000480484 RGS17Q9UGC6 210 aaPredicted RBP11.24□□□□□ -0.61
COMMD4-203ENST00000480484 SPATA31A1Q5TZJ5 1347 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 GSG1L2A8MUP6 293 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 KCNJ18B7U540 433 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 ZPR1O75312 459 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 IPO7O95373 1038 aaKnown RBP11.23□□□□□ -0.61
COMMD4-203ENST00000480484 NTSR2O95665 410 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 KCNJ12Q14500 433 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 B4GALNT4Q76KP1 1039 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 LUC7L2Q9Y383 392 aaKnown RBP11.23□□□□□ -0.61
COMMD4-203ENST00000480484 MYH13Q9UKX3 1938 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 EP400Q96L91 3159 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 MINDY4BA8MYZ0 360 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 GOLGA8KD6RF30 607 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 KRT86O43790 486 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 OPA1O60313 960 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 HERVK_113P62684 666 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 BICDL1Q6ZP65 573 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 OR8K1Q8NGG5 319 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 SPATA20Q8TB22 786 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 SLC39A13Q96H72 371 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 LRRC1Q9BTT6 524 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 NAPBQ9H115 298 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 CEP131Q9UPN4 1083 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 ITIH6Q6UXX5 1313 aa11.23□□□□□ -0.61
COMMD4-203ENST00000480484 SSBP05455 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
COMMD4-203ENST00000480484 HSD3B2P26439 372 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 COPB2P35606 906 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 CYP27A1Q02318 531 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 CHRNDQ07001 517 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 ACTN3Q08043 901 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-203ENST00000480484 IL17AQ16552 155 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 CEP57Q86XR8 500 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 HPS3Q969F9 1004 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 RPGRIP1Q96KN7 1286 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 LACRTQ9GZZ8 138 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 HSF2BPO75031 334 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 GYG1P46976 350 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 QPCTQ16769 361 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 PAPD7Q5XG87 772 aaKnown RBP11.22□□□□□ -0.61
COMMD4-203ENST00000480484 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 MEFVO15553 781 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-203ENST00000480484 KRT14P02533 472 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 CXCR5P32302 372 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 GUCY1A3Q02108 690 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 MAP3K12Q12852 859 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 TTMPQ5BVD1 217 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 TCP11X2Q5H9J9 407 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 TSEN2Q8NCE0 465 aaKnown RBP11.22□□□□□ -0.61
COMMD4-203ENST00000480484 LRRC15Q8TF66 581 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 AENQ8WTP8 325 aaKnown RBP11.22□□□□□ -0.61
COMMD4-203ENST00000480484 WASF1Q92558 559 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 N4BP2L2Q92802 583 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-203ENST00000480484 UIMC1Q96RL1 719 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 SLC4A4Q9Y6R1 1079 aa11.22□□□□□ -0.61
COMMD4-203ENST00000480484 ARAP2Q8WZ64 1704 aa11.21□□□□□ -0.61
COMMD4-203ENST00000480484 FMNL1O95466 1100 aaPredicted RBP11.21□□□□□ -0.61
COMMD4-203ENST00000480484 CALRP27797 417 aaKnown RBP11.21□□□□□ -0.61
COMMD4-203ENST00000480484 NF2P35240 595 aa11.21□□□□□ -0.61
COMMD4-203ENST00000480484 SEMA3FQ13275 785 aa11.21□□□□□ -0.61
COMMD4-203ENST00000480484 ERFEQ4G0M1 354 aa11.21□□□□□ -0.61
COMMD4-203ENST00000480484 IQCEQ6IPM2 695 aa11.21□□□□□ -0.61
COMMD4-203ENST00000480484 NELFBQ8WX92 580 aa11.21□□□□□ -0.61
COMMD4-203ENST00000480484 ALG2Q9H553 416 aa11.21□□□□□ -0.61
COMMD4-203ENST00000480484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.21□□□□□ -0.61
COMMD4-203ENST00000480484 ABCF2Q9UG63 623 aa11.21□□□□□ -0.61
COMMD4-203ENST00000480484 TRIM75PA6NK02 468 aa11.21□□□□□ -0.62
COMMD4-203ENST00000480484 RRM1P23921 792 aa11.21□□□□□ -0.62
COMMD4-203ENST00000480484 KRT83P78385 493 aa11.21□□□□□ -0.62
COMMD4-203ENST00000480484 PAK1Q13153 545 aa11.21□□□□□ -0.62
COMMD4-203ENST00000480484 TRIM14Q14142 442 aa11.21□□□□□ -0.62
COMMD4-203ENST00000480484 ZNF579Q8NAF0 562 aaKnown RBP11.21□□□□□ -0.62
COMMD4-203ENST00000480484 GSDMAQ96QA5 445 aa11.21□□□□□ -0.62
COMMD4-203ENST00000480484 SH3GL2Q99962 352 aa11.21□□□□□ -0.62
COMMD4-203ENST00000480484 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.62
COMMD4-203ENST00000480484 DIS3Q9Y2L1 958 aaKnown RBP11.21□□□□□ -0.62
COMMD4-203ENST00000480484 SPATA31A5Q5VU36 1347 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms