RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 GUCY1B3Q02153 619 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 CACNB2Q08289 660 aaPredicted RBP14.03□□□□□ -0.16
TRA2B-212ENST00000480461 LRRC26Q2I0M4 334 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 JAKMIP3Q5VZ66 844 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 KRT40Q6A162 431 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 CUL5Q93034 780 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 PGBD1Q96JS3 809 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 RMDN3Q96TC7 470 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 KATNBL1Q9H079 304 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 PXMP2Q9NR77 195 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 PCDHA6Q9UN73 950 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 PCDHA8Q9Y5H6 950 aa14.03□□□□□ -0.16
TRA2B-212ENST00000480461 LCTP09848 1927 aa14.02□□□□□ -0.16
TRA2B-212ENST00000480461 MYH6P13533 1939 aa14.02□□□□□ -0.16
TRA2B-212ENST00000480461 EIF2AK2P19525 551 aaKnown RBP14.02□□□□□ -0.17
TRA2B-212ENST00000480461 HMGN5P82970 282 aaKnown RBP14.02□□□□□ -0.17
TRA2B-212ENST00000480461 EARS2Q5JPH6 523 aaKnown RBP14.02□□□□□ -0.17
TRA2B-212ENST00000480461 TMEM63BQ5T3F8 832 aa14.02□□□□□ -0.17
TRA2B-212ENST00000480461 DNERQ8NFT8 737 aa14.02□□□□□ -0.17
TRA2B-212ENST00000480461 FBXO18Q8NFZ0 1043 aa14.02□□□□□ -0.17
TRA2B-212ENST00000480461 NSUN6Q8TEA1 469 aaKnown RBP14.02□□□□□ -0.17
TRA2B-212ENST00000480461 INTS4Q96HW7 963 aaKnown RBP14.02□□□□□ -0.17
TRA2B-212ENST00000480461 C6orf50Q9HD87 102 aa14.02□□□□□ -0.17
TRA2B-212ENST00000480461 SLC5A4Q9NY91 659 aa14.02□□□□□ -0.17
TRA2B-212ENST00000480461 PCDHA4Q9UN74 947 aa14.02□□□□□ -0.17
TRA2B-212ENST00000480461 DNAH12Q6ZR08 3092 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 ZNF236Q9UL36 1845 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 TTC28Q96AY4 2481 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 RGS20O76081 388 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 NR3C2P08235 984 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 ZNF865P0CJ78 1059 aaPredicted RBP14.01□□□□□ -0.17
TRA2B-212ENST00000480461 MRPS9P82933 396 aaKnown RBP14.01□□□□□ -0.17
TRA2B-212ENST00000480461 ZNF697Q5TEC3 545 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 ARMCX2Q7L311 632 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 VSIG10LQ86VR7 867 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 HSCBQ8IWL3 235 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 BLIDQ8IZY5 108 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 DAGLBQ8NCG7 672 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 SPRYD3Q8NCJ5 442 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 CRYGNQ8WXF5 182 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 WASF1Q92558 559 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 TNFRSF25Q93038 417 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 PDCD2LQ9BRP1 358 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 PDGFCQ9NRA1 345 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.01□□□□□ -0.17
TRA2B-212ENST00000480461 SMC3Q9UQE7 1217 aa14.01□□□□□ -0.17
TRA2B-212ENST00000480461 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.01□□□□□ -0.17
TRA2B-212ENST00000480461 FRMPD4Q14CM0 1322 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 LTBP2Q14767 1821 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 FAM205CA6NFA0 338 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 BTBD18B2RXH4 712 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 MMP1P03956 469 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 PTGS1P23219 599 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 GNA11P29992 359 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 CCND3P30281 292 aaPredicted RBP14□□□□□ -0.17
TRA2B-212ENST00000480461 NR5A1Q13285 461 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 PGM5Q15124 567 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 ARHGEF16Q5VV41 709 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 LHX8Q68G74 356 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 TAPT1Q6NXT6 567 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 EEPD1Q7L9B9 569 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 TRMT44Q8IYL2 757 aaKnown RBP14□□□□□ -0.17
TRA2B-212ENST00000480461 MSL3Q8N5Y2 521 aaKnown RBP14□□□□□ -0.17
TRA2B-212ENST00000480461 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
TRA2B-212ENST00000480461 C8orf76Q96K31 380 aa14□□□□□ -0.17
TRA2B-212ENST00000480461 ADD3Q9UEY8 706 aaKnown RBP14□□□□□ -0.17
TRA2B-212ENST00000480461 SYNGAP1Q96PV0 1343 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 ASB14A6NK59 587 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 ADCY6O43306 1168 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 CYBAP13498 195 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 ACVR2BQ13705 512 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 MFSD14CQ5VZR4 134 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 FAM177A1Q8N128 213 aaPredicted RBP13.99□□□□□ -0.17
TRA2B-212ENST00000480461 REXO1Q8N1G1 1221 aaKnown RBP13.99□□□□□ -0.17
TRA2B-212ENST00000480461 FAM184AQ8NB25 1140 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 CCDC148Q8NFR7 591 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 MAFAQ8NHW3 353 aaPredicted RBP13.99□□□□□ -0.17
TRA2B-212ENST00000480461 CYP2W1Q8TAV3 490 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 IWS1Q96ST2 819 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 CDX2Q99626 313 aaPredicted RBP13.99□□□□□ -0.17
TRA2B-212ENST00000480461 ANO3Q9BYT9 981 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 RTEL1Q9NZ71 1219 aa13.99□□□□□ -0.17
TRA2B-212ENST00000480461 KIF28PB7ZC32 967 aa13.98□□□□□ -0.17
TRA2B-212ENST00000480461 FOSP01100 380 aaPredicted RBP13.98□□□□□ -0.17
TRA2B-212ENST00000480461 MYCLP12524 364 aaPredicted RBP13.98□□□□□ -0.17
TRA2B-212ENST00000480461 LARP1BQ659C4 914 aaKnown RBP13.98□□□□□ -0.17
TRA2B-212ENST00000480461 GALNT17Q6IS24 598 aa13.98□□□□□ -0.17
TRA2B-212ENST00000480461 TEX2Q8IWB9 1127 aa13.98□□□□□ -0.17
TRA2B-212ENST00000480461 GLT8D2Q9H1C3 349 aa13.98□□□□□ -0.17
TRA2B-212ENST00000480461 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
TRA2B-212ENST00000480461 LOC102724159A0A0B4J2E5 919 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.97□□□□□ -0.17
TRA2B-212ENST00000480461 RBM47A0AV96 593 aaKnown RBP13.97□□□□□ -0.17
TRA2B-212ENST00000480461 SPDYE3A6NKU9 549 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 WNT7AO00755 349 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 EIF3JO75822 258 aaKnown RBP13.97□□□□□ -0.17
TRA2B-212ENST00000480461 XBP1P17861 261 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 ITGB5P18084 799 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms