RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 KCNJ6P48051 423 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 ERVK-21P61565 698 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 PPP2R5BQ15173 497 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 ALX1Q15699 326 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 PTGISQ16647 500 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 LEXMQ3ZCV2 418 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 GPATCH4Q5T3I0 446 aaKnown RBP8.27□□□□□ -1.09
COL17A1-205ENST00000480127 GDF6Q6KF10 455 aaPredicted RBP8.27□□□□□ -1.09
COL17A1-205ENST00000480127 RALYLQ86SE5 291 aaKnown RBP8.27□□□□□ -1.09
COL17A1-205ENST00000480127 ZNF589Q86UQ0 364 aaPredicted RBP8.27□□□□□ -1.09
COL17A1-205ENST00000480127 ALYREFQ86V81 257 aaKnown RBP8.27□□□□□ -1.09
COL17A1-205ENST00000480127 FAM178BQ8IXR5 827 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.27□□□□□ -1.09
COL17A1-205ENST00000480127 AFAP1L1Q8TED9 768 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 SCFD2Q8WU76 684 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 DHX38Q92620 1227 aaKnown RBP8.27□□□□□ -1.09
COL17A1-205ENST00000480127 KRT23Q9C075 422 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 UBE2ZQ9H832 354 aaPredicted RBP8.27□□□□□ -1.09
COL17A1-205ENST00000480127 CNNM2Q9H8M5 875 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 VAT1LQ9HCJ6 419 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 ANAPC4Q9UJX5 808 aa8.27□□□□□ -1.09
COL17A1-205ENST00000480127 TET1Q8NFU7 2136 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 PRR33A8MZF0 331 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 NBNO60934 754 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 GJB5O95377 273 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 CXCL10P02778 98 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 PARP1P09874 1014 aaKnown RBP8.26□□□□□ -1.09
COL17A1-205ENST00000480127 GOLGA8HP0CJ92 632 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 TXNP10599 105 aaKnown RBP8.26□□□□□ -1.09
COL17A1-205ENST00000480127 IL9P15248 144 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 RPS6P62753 249 aaKnown RBP8.26□□□□□ -1.09
COL17A1-205ENST00000480127 IRX6P78412 446 aaPredicted RBP8.26□□□□□ -1.09
COL17A1-205ENST00000480127 NUCB1Q02818 461 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 SART3Q15020 963 aaKnown RBP8.26□□□□□ -1.09
COL17A1-205ENST00000480127 IFIT1BQ5T764 474 aaKnown RBP8.26□□□□□ -1.09
COL17A1-205ENST00000480127 CCDC62Q6P9F0 684 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 CNKSR3Q6P9H4 555 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 LRRC8DQ7L1W4 858 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 SESTD1Q86VW0 696 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 TICAM2Q86XR7 235 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 GJD3Q8N144 294 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 DNERQ8NFT8 737 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 CAGE1Q8TC20 777 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 KAT2BQ92831 832 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 TTC14Q96N46 770 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 RAD9AQ99638 391 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 MTUS1Q9ULD2 1270 aa8.26□□□□□ -1.09
COL17A1-205ENST00000480127 SUPT16HQ9Y5B9 1047 aaKnown RBP8.26□□□□□ -1.09
COL17A1-205ENST00000480127 LINC01553A4QN01 128 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 B4E1Z4 1266 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 MMP3P08254 477 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 FGRP09769 529 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 PDHBP11177 359 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 CKBP12277 381 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 SELPP16109 830 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 ARHGAP1Q07960 439 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 RBL2Q08999 1139 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 ZNF543Q08ER8 600 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 ARHGEF16Q5VV41 709 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 TRAF7Q6Q0C0 670 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 CHST3Q7LGC8 479 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 MCF2L2Q86YR7 1114 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 TBC1D10CQ8IV04 446 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 PLEKHM2Q8IWE5 1019 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 CCDC155Q8N6L0 562 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 AFG1LQ8WV93 481 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 TGS1Q96RS0 853 aaKnown RBP8.25□□□□□ -1.09
COL17A1-205ENST00000480127 ZBED2Q9BTP6 218 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 TCP11L1Q9NUJ3 509 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 ZMYM6O95789 1325 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 NEDD4P46934 1319 aa8.25□□□□□ -1.09
COL17A1-205ENST00000480127 ABHD14A-ACY1A0A1B0GW23 586 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 GRXCR2A6NFK2 248 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 PARNO95453 639 aaKnown RBP8.24□□□□□ -1.09
COL17A1-205ENST00000480127 KCNA5P22460 613 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 MKRN4PQ13434 485 aaPredicted RBP8.24□□□□□ -1.09
COL17A1-205ENST00000480127 MBTPS1Q14703 1052 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 CDC37Q16543 378 aaPredicted RBP8.24□□□□□ -1.09
COL17A1-205ENST00000480127 LY6KQ17RY6 165 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 TRIM71Q2Q1W2 868 aaKnown RBP8.24□□□□□ -1.09
COL17A1-205ENST00000480127 ASPRV1Q53RT3 343 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 SEPT14Q6ZU15 432 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 FBXO11Q86XK2 927 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 WNT8BQ93098 351 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 ZSCAN10Q96SZ4 725 aaPredicted RBP8.24□□□□□ -1.09
COL17A1-205ENST00000480127 C17orf80Q9BSJ5 609 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 UBA5Q9GZZ9 404 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 HDAC6Q9UBN7 1215 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 GTF2IRD1Q9UHL9 959 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 MRPL11Q9Y3B7 192 aaKnown RBP8.24□□□□□ -1.09
COL17A1-205ENST00000480127 ABCB11O95342 1321 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 WDR19Q8NEZ3 1342 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 SALL3Q9BXA9 1300 aa8.24□□□□□ -1.09
COL17A1-205ENST00000480127 POTEB3A0JP26 581 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 IFIT3O14879 490 aaKnown RBP8.23□□□□□ -1.09
COL17A1-205ENST00000480127 CFBP00751 764 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 GH1P01241 217 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 IGHDP01880 384 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 SNHG28P0DPA3 235 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms