RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 DDX42Q86XP3 938 aaKnown RBP eCLIP22.86■■□□□ 1.25
COL13A1-208ENST00000479733 PNMA1Q8ND90 353 aa22.86■■□□□ 1.25
COL13A1-208ENST00000479733 GLIS3Q8NEA6 775 aa22.86■■□□□ 1.25
COL13A1-208ENST00000479733 LCA5LO95447 670 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 KLRC1P26715 233 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 TFAP4Q01664 338 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 SF3A3Q12874 501 aaKnown RBP eCLIP22.85■■□□□ 1.25
COL13A1-208ENST00000479733 CCDC84Q86UT8 332 aaPredicted RBP22.85■■□□□ 1.25
COL13A1-208ENST00000479733 SPATS2Q86XZ4 545 aaKnown RBP22.85■■□□□ 1.25
COL13A1-208ENST00000479733 CCDC114Q96M63 670 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 GOLPH3Q9H4A6 298 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 DCP1AQ9NPI6 582 aaPredicted RBP22.85■■□□□ 1.25
COL13A1-208ENST00000479733 DUOX1Q9NRD9 1551 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 GOLGA6L10A6NI86 522 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 ITGB3BPQ13352 177 aaPredicted RBP22.85■■□□□ 1.25
COL13A1-208ENST00000479733 MAN2A1Q16706 1144 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 ODF2Q5BJF6 829 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 CEP57Q86XR8 500 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 C7orf25Q9BPX7 421 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 PDXDC1Q6P996 788 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 DNAAF5Q86Y56 855 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 GIMAP7Q8NHV1 300 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 VCPKMTQ9H867 229 aa22.85■■□□□ 1.25
COL13A1-208ENST00000479733 BCORQ6W2J9 1755 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 FAM107AO95990 144 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 FGRP09769 529 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 OR52Z1P0C646 297 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 TXKP42681 527 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 SLC35G1Q2M3R5 365 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 CENPPQ6IPU0 288 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 PACSIN1Q9BY11 444 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 SPRED3Q2MJR0 410 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 HGSNATQ68CP4 663 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 TBC1D5Q92609 795 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 CYFIP2Q96F07 1278 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 CARD10Q9BWT7 1032 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 SLC40A1Q9NP59 571 aa22.84■■□□□ 1.25
COL13A1-208ENST00000479733 M0R2N6 131 aa22.83■■□□□ 1.25
COL13A1-208ENST00000479733 PJA2O43164 708 aa22.83■■□□□ 1.25
COL13A1-208ENST00000479733 ASTE1Q2TB18 679 aaPredicted RBP22.83■■□□□ 1.25
COL13A1-208ENST00000479733 CCDC121Q6ZUS5 278 aa22.83■■□□□ 1.25
COL13A1-208ENST00000479733 MCM9Q9NXL9 1143 aa22.83■■□□□ 1.25
COL13A1-208ENST00000479733 MYH3P11055 1940 aa22.83■■□□□ 1.25
COL13A1-208ENST00000479733 USP17L3A6NCW0 530 aa22.83■■□□□ 1.24
COL13A1-208ENST00000479733 USP17L4A6NCW7 530 aa22.83■■□□□ 1.24
COL13A1-208ENST00000479733 CYTH3O43739 400 aa22.83■■□□□ 1.24
COL13A1-208ENST00000479733 USP17L8P0C7I0 530 aa22.83■■□□□ 1.24
COL13A1-208ENST00000479733 CDR1P51861 262 aa22.83■■□□□ 1.24
COL13A1-208ENST00000479733 AMPD3Q01432 767 aa22.83■■□□□ 1.24
COL13A1-208ENST00000479733 USP17L1Q7RTZ2 530 aa22.83■■□□□ 1.24
COL13A1-208ENST00000479733 DOCK2Q92608 1830 aa22.83■■□□□ 1.24
COL13A1-208ENST00000479733 GOLGA6L7A0A1B0GV03 622 aa22.82■■□□□ 1.24
COL13A1-208ENST00000479733 CHUKO15111 745 aa22.82■■□□□ 1.24
COL13A1-208ENST00000479733 POLR2FP61218 127 aaKnown RBP22.82■■□□□ 1.24
COL13A1-208ENST00000479733 KIAA0753Q2KHM9 967 aa22.82■■□□□ 1.24
COL13A1-208ENST00000479733 DYNLL2Q96FJ2 89 aa22.82■■□□□ 1.24
COL13A1-208ENST00000479733 MYMKA6NI61 221 aa22.82■■□□□ 1.24
COL13A1-208ENST00000479733 HMGB1P1B2RPK0 211 aaPredicted RBP22.82■■□□□ 1.24
COL13A1-208ENST00000479733 ORC4O43929 436 aa22.82■■□□□ 1.24
COL13A1-208ENST00000479733 CDC37Q16543 378 aaPredicted RBP22.82■■□□□ 1.24
COL13A1-208ENST00000479733 ADAMTS1Q9UHI8 967 aa22.82■■□□□ 1.24
COL13A1-208ENST00000479733 GCOM1H8Y6P7 765 aaPredicted RBP22.81■■□□□ 1.24
COL13A1-208ENST00000479733 TLR2O60603 784 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 MYZAPP0CAP1 466 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 QPCTQ16769 361 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 SLC9C1Q4G0N8 1177 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 IL17RBQ9NRM6 502 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 ATXN2Q99700 1313 aaKnown RBP22.81■■□□□ 1.24
COL13A1-208ENST00000479733 KCNK3O14649 394 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 PDHBP11177 359 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 MECOMQ03112 1051 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 DDR1Q08345 913 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 KCNMA1Q12791 1236 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 SV2BQ7L1I2 683 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 RNF10Q8N5U6 811 aaKnown RBP22.81■■□□□ 1.24
COL13A1-208ENST00000479733 CALML4Q96GE6 196 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 SCLT1Q96NL6 688 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 MMTAG2Q9BU76 263 aaKnown RBP22.81■■□□□ 1.24
COL13A1-208ENST00000479733 AP1M1Q9BXS5 423 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 CUEDC2Q9H467 287 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 VAT1LQ9HCJ6 419 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 SUFUQ9UMX1 484 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 STX8Q9UNK0 236 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 HSD17B3P37058 310 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 SMTNP53814 917 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 CAVIN4Q5BKX8 364 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 YTHDF3Q7Z739 585 aaKnown RBP22.81■■□□□ 1.24
COL13A1-208ENST00000479733 WHAMMQ8TF30 809 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 DDX20Q9UHI6 824 aaKnown RBP22.81■■□□□ 1.24
COL13A1-208ENST00000479733 TSKSQ9UJT2 592 aa22.81■■□□□ 1.24
COL13A1-208ENST00000479733 COL1A1P02452 1464 aaPredicted RBP22.8■■□□□ 1.24
COL13A1-208ENST00000479733 CTNNA1P35221 906 aaKnown RBP22.8■■□□□ 1.24
COL13A1-208ENST00000479733 ERVK-9P63128 1117 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 RAPGEF1Q13905 1077 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 SFMBT2Q5VUG0 894 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 CRNKL1Q9BZJ0 848 aaKnown RBP22.8■■□□□ 1.24
COL13A1-208ENST00000479733 TMBIM4Q9HC24 238 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 SH3GLB2Q9NR46 395 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 ERVV-1B6SEH8 477 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 STXBP3O00186 592 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms