RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 PTPDC1A2A3K4 754 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 PROB1E7EW31 1015 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 MCCP23508 829 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 CALML3P27482 149 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 GTF2F1P35269 517 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC18-208ENST00000479653 PDE4DQ08499 809 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 SIGLEC14Q08ET2 396 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 ERC1Q8IUD2 1116 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 TRMT2AQ8IZ69 625 aaKnown RBP13.26□□□□□ -0.29
CCDC18-208ENST00000479653 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 DBF4BQ8NFT6 615 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 SCFD2Q8WU76 684 aa13.26□□□□□ -0.29
CCDC18-208ENST00000479653 DCHS1Q96JQ0 3298 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 PRR23AA6NEV1 266 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 LINC01565O15544 149 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 CTNNB1P35222 781 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 NDUFV1P49821 464 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 RBL2Q08999 1139 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 MBTPS1Q14703 1052 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 KCTD1Q719H9 257 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 CHST3Q7LGC8 479 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 SESTD1Q86VW0 696 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 TMEM57Q8N5G2 664 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 AFG1LQ8WV93 481 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 MPHOSPH6Q99547 160 aaKnown RBP13.25□□□□□ -0.29
CCDC18-208ENST00000479653 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 HDAC6Q9UBN7 1215 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 PRR12Q9ULL5 1215 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 SYNPO2Q9UMS6 1093 aa13.25□□□□□ -0.29
CCDC18-208ENST00000479653 WDR87Q6ZQQ6 2873 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 PTPRSQ13332 1948 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 TBX10O75333 385 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 KRT37O76014 449 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 PTK7Q13308 1070 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 SBK1Q52WX2 424 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 TOP1MTQ969P6 601 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 RPGRIP1Q96KN7 1286 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 PUS7LQ9H0K6 701 aaKnown RBP13.24□□□□□ -0.29
CCDC18-208ENST00000479653 BOLA2Q9H3K6 86 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 ZNF287Q9HBT7 754 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 GTF2IRD1Q9UHL9 959 aa13.24□□□□□ -0.29
CCDC18-208ENST00000479653 MYH8P13535 1937 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 TANC1Q9C0D5 1861 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 SIP14410 1827 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 EMSYQ7Z589 1322 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 LOC730098B7Z3J9 87 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 GRM6O15303 877 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 MMP3P08254 477 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 IFIT2P09913 472 aaKnown RBP13.23□□□□□ -0.29
CCDC18-208ENST00000479653 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 CASTP20810 708 aaKnown RBP13.23□□□□□ -0.29
CCDC18-208ENST00000479653 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
CCDC18-208ENST00000479653 UBE3CQ15386 1083 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 TRAF7Q6Q0C0 670 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 ADSSL1Q8N142 457 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 KAT2BQ92831 832 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 ASIC4Q96FT7 647 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 INCENPQ9NQS7 918 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
CCDC18-208ENST00000479653 RSPH10B2B2RC85 870 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 NFIBO00712 420 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
CCDC18-208ENST00000479653 RGS20O76081 388 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 ARIH2O95376 493 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 ICAM1P05362 532 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 RSPH10BP0C881 870 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 THPOP40225 353 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 ZNF200P98182 395 aaPredicted RBP13.22□□□□□ -0.29
CCDC18-208ENST00000479653 ADAM15Q13444 863 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 RCSD1Q6JBY9 416 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 SLC30A10Q6XR72 485 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 DHX37Q8IY37 1157 aaKnown RBP13.22□□□□□ -0.29
CCDC18-208ENST00000479653 CLASRPQ8N2M8 674 aaKnown RBP13.22□□□□□ -0.29
CCDC18-208ENST00000479653 FIBCD1Q8N539 461 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 RHPN1Q8TCX5 695 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 WNT8BQ93098 351 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 IL17RAQ96F46 866 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 C11orf84Q9BUA3 381 aaPredicted RBP13.22□□□□□ -0.29
CCDC18-208ENST00000479653 IFIH1Q9BYX4 1025 aaKnown RBP13.22□□□□□ -0.29
CCDC18-208ENST00000479653 LMAN2LQ9H0V9 348 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 CACNA1GO43497 2377 aa13.22□□□□□ -0.29
CCDC18-208ENST00000479653 EPG5Q9HCE0 2579 aa13.21□□□□□ -0.29
CCDC18-208ENST00000479653 MED19A0JLT2 244 aaPredicted RBP13.21□□□□□ -0.29
CCDC18-208ENST00000479653 EYA4O95677 639 aa13.21□□□□□ -0.29
CCDC18-208ENST00000479653 PDGFBP01127 241 aaPredicted RBP13.21□□□□□ -0.29
CCDC18-208ENST00000479653 RB1P06400 928 aa13.21□□□□□ -0.29
CCDC18-208ENST00000479653 BMPR1AP36894 532 aa13.21□□□□□ -0.29
CCDC18-208ENST00000479653 NBL1P41271 181 aa13.21□□□□□ -0.29
CCDC18-208ENST00000479653 PSEN2P49810 448 aa13.21□□□□□ -0.29
CCDC18-208ENST00000479653 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC18-208ENST00000479653 NUBP1P53384 320 aa13.21□□□□□ -0.29
CCDC18-208ENST00000479653 RRP1P56182 461 aaKnown RBP13.21□□□□□ -0.29
CCDC18-208ENST00000479653 LY6KQ17RY6 165 aa13.21□□□□□ -0.29
CCDC18-208ENST00000479653 TRIM71Q2Q1W2 868 aaKnown RBP13.21□□□□□ -0.29
CCDC18-208ENST00000479653 RNF207Q6ZRF8 634 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms