RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 GPCPD1Q9NPB8 672 aa20.46■□□□□ 0.87
HMGN1-212ENST00000479586 GTF2IRD1Q9UHL9 959 aa20.46■□□□□ 0.87
HMGN1-212ENST00000479586 USP34Q70CQ2 3546 aa20.45■□□□□ 0.86
HMGN1-212ENST00000479586 EFCAB14O75071 495 aa20.45■□□□□ 0.86
HMGN1-212ENST00000479586 NOVP48745 357 aa20.45■□□□□ 0.86
HMGN1-212ENST00000479586 CCDC62Q6P9F0 684 aa20.45■□□□□ 0.86
HMGN1-212ENST00000479586 DNERQ8NFT8 737 aa20.45■□□□□ 0.86
HMGN1-212ENST00000479586 WNT8BQ93098 351 aa20.45■□□□□ 0.86
HMGN1-212ENST00000479586 HDAC6Q9UBN7 1215 aa20.45■□□□□ 0.86
HMGN1-212ENST00000479586 INSL6Q9Y581 213 aa20.45■□□□□ 0.86
HMGN1-212ENST00000479586 ARHGAP1Q07960 439 aa20.44■□□□□ 0.86
HMGN1-212ENST00000479586 LY6KQ17RY6 165 aa20.44■□□□□ 0.86
HMGN1-212ENST00000479586 TRIM71Q2Q1W2 868 aaKnown RBP20.44■□□□□ 0.86
HMGN1-212ENST00000479586 ZNF618Q5T7W0 954 aa20.44■□□□□ 0.86
HMGN1-212ENST00000479586 EP400NLQ6ZTU2 488 aa20.44■□□□□ 0.86
HMGN1-212ENST00000479586 CHST3Q7LGC8 479 aa20.44■□□□□ 0.86
HMGN1-212ENST00000479586 MICAL3Q7RTP6 2002 aa20.44■□□□□ 0.86
HMGN1-212ENST00000479586 C19orf67A6NJJ6 358 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 FOXP2O15409 715 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 RANBP6O60518 1105 aaKnown RBP20.43■□□□□ 0.86
HMGN1-212ENST00000479586 PTPROQ16827 1216 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 EPC2Q52LR7 807 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 TIGD5Q53EQ6 642 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 TCEAL5Q5H9L2 206 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 BANK1Q8NDB2 785 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 PHOX2BQ99453 314 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 CTNNA3Q9UI47 895 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 MYO7AQ13402 2215 aa20.43■□□□□ 0.86
HMGN1-212ENST00000479586 LGR5O75473 907 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 GH1P01241 217 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 MS4A1P11836 297 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 HTRA4P83105 476 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-212ENST00000479586 PTK7Q13308 1070 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 MKRN4PQ13434 485 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-212ENST00000479586 SEPT14Q6ZU15 432 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 ADHFE1Q8IWW8 467 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 MYOCDQ8IZQ8 938 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 C7orf31Q8N865 590 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 SP7Q8TDD2 431 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-212ENST00000479586 PABPC5Q96DU9 382 aaKnown RBP20.42■□□□□ 0.86
HMGN1-212ENST00000479586 GPATCH3Q96I76 525 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 ALG1Q9BT22 464 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 PRKAG3Q9UGI9 489 aa20.42■□□□□ 0.86
HMGN1-212ENST00000479586 B4DLN1 442 aa20.41■□□□□ 0.86
HMGN1-212ENST00000479586 CASTP20810 708 aaKnown RBP20.41■□□□□ 0.86
HMGN1-212ENST00000479586 IRS1P35568 1242 aa20.41■□□□□ 0.86
HMGN1-212ENST00000479586 PSEN2P49810 448 aa20.41■□□□□ 0.86
HMGN1-212ENST00000479586 MRPL12P52815 198 aaKnown RBP20.41■□□□□ 0.86
HMGN1-212ENST00000479586 ZNF200P98182 395 aaPredicted RBP20.41■□□□□ 0.86
HMGN1-212ENST00000479586 HNRNPUQ00839 825 aaKnown RBP eCLIP20.41■□□□□ 0.86
HMGN1-212ENST00000479586 COL19A1Q14993 1142 aa20.41■□□□□ 0.86
HMGN1-212ENST00000479586 TMEM47Q9BQJ4 181 aa20.41■□□□□ 0.86
HMGN1-212ENST00000479586 AMHP03971 560 aa20.4■□□□□ 0.86
HMGN1-212ENST00000479586 DGKDQ16760 1214 aa20.4■□□□□ 0.86
HMGN1-212ENST00000479586 ZMYM1Q5SVZ6 1142 aa20.4■□□□□ 0.86
HMGN1-212ENST00000479586 DBF4BQ8NFT6 615 aa20.4■□□□□ 0.86
HMGN1-212ENST00000479586 FAM50BQ9Y247 325 aa20.4■□□□□ 0.86
HMGN1-212ENST00000479586 CFAP54Q96N23 3096 aa20.4■□□□□ 0.86
HMGN1-212ENST00000479586 WDR19Q8NEZ3 1342 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 H3BNC9 293 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 ZNF286BP0CG31 522 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 PDHBP11177 359 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 TOP1P11387 765 aaKnown RBP20.39■□□□□ 0.85
HMGN1-212ENST00000479586 GPM6BQ13491 265 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 HIC1Q14526 733 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 MFSD10Q14728 455 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 USH1GQ495M9 461 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 MFSD14AQ96MC6 490 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 SAMD11Q96NU1 681 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 CLDND1Q9NY35 253 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 PNMA2Q9UL42 364 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 TECTAO75443 2155 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 KIAA1217Q5T5P2 1943 aa20.39■□□□□ 0.85
HMGN1-212ENST00000479586 ATG2AQ2TAZ0 1938 aa20.38■□□□□ 0.85
HMGN1-212ENST00000479586 ORC4O43929 436 aa20.38■□□□□ 0.85
HMGN1-212ENST00000479586 F2P00734 622 aa20.38■□□□□ 0.85
HMGN1-212ENST00000479586 KIAA0753Q2KHM9 967 aa20.38■□□□□ 0.85
HMGN1-212ENST00000479586 TBC1D5Q92609 795 aa20.38■□□□□ 0.85
HMGN1-212ENST00000479586 NSUN3Q9H649 340 aaKnown RBP20.38■□□□□ 0.85
HMGN1-212ENST00000479586 MUTYHQ9UIF7 546 aa20.38■□□□□ 0.85
HMGN1-212ENST00000479586 NLRC5Q86WI3 1866 aa20.38■□□□□ 0.85
HMGN1-212ENST00000479586 EMSYQ7Z589 1322 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 HAS3O00219 553 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 LTBRP36941 435 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 ZNF543Q08ER8 600 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 CLUL1Q15846 466 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 RPAINQ86UA6 219 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 TMEM192Q8IY95 271 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 PRSS33Q8NF86 280 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 TAAR1Q96RJ0 339 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 YME1L1Q96TA2 773 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 FSD1Q9BTV5 496 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 KATNAL1Q9BW62 490 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 UPF3BQ9BZI7 483 aaKnown RBP20.37■□□□□ 0.85
HMGN1-212ENST00000479586 COL20A1Q9P218 1284 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 ANAPC4Q9UJX5 808 aa20.37■□□□□ 0.85
HMGN1-212ENST00000479586 FBXO11Q86XK2 927 aa20.36■□□□□ 0.85
HMGN1-212ENST00000479586 RGS22Q8NE09 1264 aa20.36■□□□□ 0.85
HMGN1-212ENST00000479586 TOMM22Q9NS69 142 aa20.36■□□□□ 0.85
HMGN1-212ENST00000479586 DDX41Q9UJV9 622 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms