RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ST18O60284 1047 aa23.49■■□□□ 1.35
VARS-224ENST00000479051 TXNP10599 105 aaKnown RBP23.49■■□□□ 1.35
VARS-224ENST00000479051 GNA11P29992 359 aa23.49■■□□□ 1.35
VARS-224ENST00000479051 ME3Q16798 604 aa23.49■■□□□ 1.35
VARS-224ENST00000479051 KCNV1Q6PIU1 500 aa23.49■■□□□ 1.35
VARS-224ENST00000479051 GTF3C6Q969F1 213 aa23.49■■□□□ 1.35
VARS-224ENST00000479051 TBC1D32Q96NH3 1257 aa23.49■■□□□ 1.35
VARS-224ENST00000479051 SH3GLB2Q9NR46 395 aa23.49■■□□□ 1.35
VARS-224ENST00000479051 DYNC1LI2O43237 492 aaPredicted RBP23.48■■□□□ 1.35
VARS-224ENST00000479051 ZEB2O60315 1214 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 COL6A1P12109 1028 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 CST5P28325 142 aaPredicted RBP23.48■■□□□ 1.35
VARS-224ENST00000479051 GNPTABQ3T906 1256 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 MCTP2Q6DN12 878 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 FAM177A1Q8N128 213 aaPredicted RBP23.48■■□□□ 1.35
VARS-224ENST00000479051 BICD2Q8TD16 824 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 SENP6Q9GZR1 1112 aaPredicted RBP23.48■■□□□ 1.35
VARS-224ENST00000479051 ZMYND12Q9H0C1 365 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 PCDHA6Q9UN73 950 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 PCDHA8Q9Y5H6 950 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 MRVI1Q9Y6F6 885 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 STK36Q9NRP7 1315 aa23.48■■□□□ 1.35
VARS-224ENST00000479051 MOXD2PA6NHM9 499 aa23.47■■□□□ 1.35
VARS-224ENST00000479051 AP3B2Q13367 1082 aa23.47■■□□□ 1.35
VARS-224ENST00000479051 BRDTQ58F21 947 aaPredicted RBP23.47■■□□□ 1.35
VARS-224ENST00000479051 GNASQ5JWF2 1037 aa23.47■■□□□ 1.35
VARS-224ENST00000479051 PCNX4Q63HM2 1172 aa23.47■■□□□ 1.35
VARS-224ENST00000479051 NECAB1Q8N987 351 aa23.47■■□□□ 1.35
VARS-224ENST00000479051 KLHDC9Q8NEP7 349 aa23.47■■□□□ 1.35
VARS-224ENST00000479051 IL31RAQ8NI17 732 aa23.47■■□□□ 1.35
VARS-224ENST00000479051 DPF3Q92784 378 aa23.47■■□□□ 1.35
VARS-224ENST00000479051 ZSCAN31Q96LW9 406 aaPredicted RBP23.47■■□□□ 1.35
VARS-224ENST00000479051 PHF24Q9UPV7 400 aa23.47■■□□□ 1.35
VARS-224ENST00000479051 XBP1P17861 261 aa23.46■■□□□ 1.35
VARS-224ENST00000479051 NKX3-2P78367 333 aa23.46■■□□□ 1.35
VARS-224ENST00000479051 FSCN1Q16658 493 aaKnown RBP23.46■■□□□ 1.35
VARS-224ENST00000479051 OR6J1Q8NGC5 347 aa23.46■■□□□ 1.35
VARS-224ENST00000479051 WASF1Q92558 559 aa23.46■■□□□ 1.35
VARS-224ENST00000479051 LARGE1O95461 756 aa23.45■■□□□ 1.34
VARS-224ENST00000479051 CPT1AP50416 773 aa23.45■■□□□ 1.34
VARS-224ENST00000479051 NLRP5P59047 1200 aa23.45■■□□□ 1.34
VARS-224ENST00000479051 KCNA10Q16322 511 aa23.45■■□□□ 1.34
VARS-224ENST00000479051 REXO1Q8N1G1 1221 aaKnown RBP23.45■■□□□ 1.34
VARS-224ENST00000479051 SH2B1Q9NRF2 756 aaPredicted RBP23.45■■□□□ 1.34
VARS-224ENST00000479051 VPS54Q9P1Q0 977 aa23.45■■□□□ 1.34
VARS-224ENST00000479051 KIAA1217Q5T5P2 1943 aa23.45■■□□□ 1.34
VARS-224ENST00000479051 GH1P01241 217 aa23.44■■□□□ 1.34
VARS-224ENST00000479051 TGFB3P10600 412 aa23.44■■□□□ 1.34
VARS-224ENST00000479051 ACLYP53396 1101 aa23.44■■□□□ 1.34
VARS-224ENST00000479051 CCDC62Q6P9F0 684 aa23.44■■□□□ 1.34
VARS-224ENST00000479051 NLRX1Q86UT6 975 aa23.44■■□□□ 1.34
VARS-224ENST00000479051 ANO3Q9BYT9 981 aa23.44■■□□□ 1.34
VARS-224ENST00000479051 ORC3Q9UBD5 711 aaPredicted RBP23.44■■□□□ 1.34
VARS-224ENST00000479051 MYADML2A6NDP7 307 aa23.43■■□□□ 1.34
VARS-224ENST00000479051 ARIH2O95376 493 aa23.43■■□□□ 1.34
VARS-224ENST00000479051 MRPS9P82933 396 aaKnown RBP23.43■■□□□ 1.34
VARS-224ENST00000479051 FERMT2Q96AC1 680 aa23.43■■□□□ 1.34
VARS-224ENST00000479051 GLT1D1Q96MS3 346 aa23.43■■□□□ 1.34
VARS-224ENST00000479051 INPP4AQ96PE3 977 aaPredicted RBP23.43■■□□□ 1.34
VARS-224ENST00000479051 RTEL1Q9NZ71 1219 aa23.43■■□□□ 1.34
VARS-224ENST00000479051 DDX41Q9UJV9 622 aaKnown RBP23.43■■□□□ 1.34
VARS-224ENST00000479051 A0A1W2PQ45 241 aaPredicted RBP23.42■■□□□ 1.34
VARS-224ENST00000479051 A0A1W2PQY0 241 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 FIBPO43427 364 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 EVI5O60447 810 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 ASGR1P07306 291 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 CLK2P49760 499 aaKnown RBP23.42■■□□□ 1.34
VARS-224ENST00000479051 BEX3Q00994 111 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 LY6KQ17RY6 165 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 TMEM63BQ5T3F8 832 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 JAKMIP3Q5VZ66 844 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 CCSAPQ6IQ19 270 aaPredicted RBP23.42■■□□□ 1.34
VARS-224ENST00000479051 GALNT17Q6IS24 598 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 VTI1AQ96AJ9 217 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 CDHR1Q96JP9 859 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 STARD7Q9NQZ5 370 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 NR2E3Q9Y5X4 410 aa23.42■■□□□ 1.34
VARS-224ENST00000479051 CABYRO75952 493 aa23.41■■□□□ 1.34
VARS-224ENST00000479051 RGS20O76081 388 aa23.41■■□□□ 1.34
VARS-224ENST00000479051 CTDNEP1O95476 244 aa23.41■■□□□ 1.34
VARS-224ENST00000479051 MCM2P49736 904 aa23.41■■□□□ 1.34
VARS-224ENST00000479051 ATN1P54259 1190 aaPredicted RBP23.41■■□□□ 1.34
VARS-224ENST00000479051 NSUN7Q8NE18 718 aaKnown RBP23.41■■□□□ 1.34
VARS-224ENST00000479051 COPS5Q92905 334 aa23.41■■□□□ 1.34
VARS-224ENST00000479051 ZFP91Q96JP5 570 aaPredicted RBP23.41■■□□□ 1.34
VARS-224ENST00000479051 POLR3EQ9NVU0 708 aa23.41■■□□□ 1.34
VARS-224ENST00000479051 TMEM260Q9NX78 707 aa23.41■■□□□ 1.34
VARS-224ENST00000479051 CTAGE5O15320 804 aa23.4■■□□□ 1.34
VARS-224ENST00000479051 KPNA6O60684 536 aa23.4■■□□□ 1.34
VARS-224ENST00000479051 ICAM3P32942 547 aa23.4■■□□□ 1.34
VARS-224ENST00000479051 SREBF1P36956 1147 aa23.4■■□□□ 1.34
VARS-224ENST00000479051 IRX5P78411 483 aaPredicted RBP23.4■■□□□ 1.34
VARS-224ENST00000479051 LAMC2Q13753 1193 aa23.4■■□□□ 1.34
VARS-224ENST00000479051 SLC39A5Q6ZMH5 540 aa23.4■■□□□ 1.34
VARS-224ENST00000479051 DHX37Q8IY37 1157 aaKnown RBP23.4■■□□□ 1.34
VARS-224ENST00000479051 GPRASP2Q96D09 838 aa23.4■■□□□ 1.34
VARS-224ENST00000479051 PGBD1Q96JS3 809 aa23.4■■□□□ 1.34
VARS-224ENST00000479051 LLPHQ9BRT6 129 aaKnown RBP23.4■■□□□ 1.34
VARS-224ENST00000479051 PCDHA4Q9UN74 947 aa23.4■■□□□ 1.34
VARS-224ENST00000479051 ELP1O95163 1332 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms