RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SELPP16109 830 aa17■□□□□ 0.31
USP11-207ENST00000478596 CTC1Q2NKJ3 1217 aa17■□□□□ 0.31
USP11-207ENST00000478596 EPC2Q52LR7 807 aa17■□□□□ 0.31
USP11-207ENST00000478596 EP400NLQ6ZTU2 488 aa17■□□□□ 0.31
USP11-207ENST00000478596 SP7Q8TDD2 431 aaPredicted RBP17■□□□□ 0.31
USP11-207ENST00000478596 STRBPQ96SI9 672 aaKnown RBP17■□□□□ 0.31
USP11-207ENST00000478596 NOD1Q9Y239 953 aa17■□□□□ 0.31
USP11-207ENST00000478596 CYP2D7A0A087X1C5 515 aa16.99■□□□□ 0.31
USP11-207ENST00000478596 H3BNC9 293 aa16.99■□□□□ 0.31
USP11-207ENST00000478596 MBTPS2O43462 519 aa16.99■□□□□ 0.31
USP11-207ENST00000478596 PRKAB2O43741 272 aa16.99■□□□□ 0.31
USP11-207ENST00000478596 KPNA6O60684 536 aa16.99■□□□□ 0.31
USP11-207ENST00000478596 RBL2Q08999 1139 aa16.99■□□□□ 0.31
USP11-207ENST00000478596 UPF2Q9HAU5 1272 aaKnown RBP16.99■□□□□ 0.31
USP11-207ENST00000478596 SCN10AQ9Y5Y9 1956 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 NBNO60934 754 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 HTRA4P83105 476 aaPredicted RBP16.98■□□□□ 0.31
USP11-207ENST00000478596 ZXDAP98168 799 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 IKBKEQ14164 716 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 TCTN1Q2MV58 587 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 TKFCQ3LXA3 575 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 BRDTQ58F21 947 aaPredicted RBP16.98■□□□□ 0.31
USP11-207ENST00000478596 LRRC8DQ7L1W4 858 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 ASCL5Q7RTU5 278 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 RPAINQ86UA6 219 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 CTAGE1Q96RT6 745 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 WDR11Q9BZH6 1224 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 RNF146Q9NTX7 359 aa16.98■□□□□ 0.31
USP11-207ENST00000478596 RIF1Q5UIP0 2472 aaKnown RBP16.98■□□□□ 0.31
USP11-207ENST00000478596 STXBP3O00186 592 aa16.97■□□□□ 0.31
USP11-207ENST00000478596 ID4P47928 161 aa16.97■□□□□ 0.31
USP11-207ENST00000478596 NUBP1P53384 320 aa16.97■□□□□ 0.31
USP11-207ENST00000478596 SMAD4Q13485 552 aaKnown RBP16.97■□□□□ 0.31
USP11-207ENST00000478596 PTGISQ16647 500 aa16.97■□□□□ 0.31
USP11-207ENST00000478596 VPS53Q5VIR6 699 aa16.97■□□□□ 0.31
USP11-207ENST00000478596 FAM117BQ6P1L5 589 aa16.97■□□□□ 0.31
USP11-207ENST00000478596 PPP1R13LQ8WUF5 828 aa16.97■□□□□ 0.31
USP11-207ENST00000478596 IL25Q9H293 177 aa16.97■□□□□ 0.31
USP11-207ENST00000478596 ARPP21Q9UBL0 812 aaPredicted RBP16.97■□□□□ 0.31
USP11-207ENST00000478596 KMT2EQ8IZD2 1858 aa16.97■□□□□ 0.31
USP11-207ENST00000478596 RBM47A0AV96 593 aaKnown RBP16.96■□□□□ 0.31
USP11-207ENST00000478596 PRR23AA6NEV1 266 aa16.96■□□□□ 0.31
USP11-207ENST00000478596 A6NJR5 290 aa16.96■□□□□ 0.31
USP11-207ENST00000478596 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
USP11-207ENST00000478596 MCCP23508 829 aa16.96■□□□□ 0.31
USP11-207ENST00000478596 VCPP55072 806 aaKnown RBP16.96■□□□□ 0.31
USP11-207ENST00000478596 GPM6BQ13491 265 aa16.96■□□□□ 0.31
USP11-207ENST00000478596 C8orf34Q49A92 452 aa16.96■□□□□ 0.31
USP11-207ENST00000478596 OR6J1Q8NGC5 347 aa16.96■□□□□ 0.31
USP11-207ENST00000478596 CYP39A1Q9NYL5 469 aa16.96■□□□□ 0.31
USP11-207ENST00000478596 SYNPO2Q9UMS6 1093 aa16.96■□□□□ 0.31
USP11-207ENST00000478596 MINDY4BA8MYZ0 360 aa16.95■□□□□ 0.3
USP11-207ENST00000478596 PATL2C9JE40 543 aaKnown RBP16.95■□□□□ 0.3
USP11-207ENST00000478596 AVPR2P30518 371 aa16.95■□□□□ 0.3
USP11-207ENST00000478596 DLX2Q07687 328 aaPredicted RBP16.95■□□□□ 0.3
USP11-207ENST00000478596 SESTD1Q86VW0 696 aa16.95■□□□□ 0.3
USP11-207ENST00000478596 TRERF1Q96PN7 1200 aa16.95■□□□□ 0.3
USP11-207ENST00000478596 DSCC1Q9BVC3 393 aa16.95■□□□□ 0.3
USP11-207ENST00000478596 EPB41L4AQ9HCS5 686 aaPredicted RBP16.95■□□□□ 0.3
USP11-207ENST00000478596 TRPC6Q9Y210 931 aa16.95■□□□□ 0.3
USP11-207ENST00000478596 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
USP11-207ENST00000478596 GREB1LQ9C091 1923 aaPredicted RBP16.94■□□□□ 0.3
USP11-207ENST00000478596 LOC102724159A0A0B4J2E5 919 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 GSG1L2A8MUP6 293 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 SIGLEC14Q08ET2 396 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
USP11-207ENST00000478596 PWP2Q15269 919 aaKnown RBP16.94■□□□□ 0.3
USP11-207ENST00000478596 CLUL1Q15846 466 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 IFNL3Q8IZI9 196 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
USP11-207ENST00000478596 MKL1Q969V6 931 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 CACNA1BQ00975 2339 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 EPG5Q9HCE0 2579 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 PLXNA3P51805 1871 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 FAM186AA6NE01 2351 aa16.94■□□□□ 0.3
USP11-207ENST00000478596 H0Y858 1186 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 NKRFO15226 690 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP11-207ENST00000478596 SLC3A2P08195 630 aaKnown RBP16.93■□□□□ 0.3
USP11-207ENST00000478596 CKBP12277 381 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 NBL1P41271 181 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 PTH1RQ03431 593 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 CBX2Q14781 532 aaPredicted RBP16.93■□□□□ 0.3
USP11-207ENST00000478596 IMMTQ16891 758 aaKnown RBP16.93■□□□□ 0.3
USP11-207ENST00000478596 GIMAP6Q6P9H5 292 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP11-207ENST00000478596 FBXO11Q86XK2 927 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 TMEM192Q8IY95 271 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 STK11IPQ8N1F8 1099 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 GMCL1P1Q8NEA9 526 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 ASIC4Q96FT7 647 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 TLR9Q9NR96 1032 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 CLIP2Q9UDT6 1046 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 RBM8AQ9Y5S9 174 aaKnown RBP16.93■□□□□ 0.3
USP11-207ENST00000478596 ZMYM6O95789 1325 aa16.93■□□□□ 0.3
USP11-207ENST00000478596 GVINP1Q7Z2Y8 2422 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 COL4A6Q14031 1691 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 IGKV6D-41A0A0C4DH26 115 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 LOC730098B7Z3J9 87 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 AMHP03971 560 aa16.92■□□□□ 0.3
USP11-207ENST00000478596 RASA1P20936 1047 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms