RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 DDX41Q9UJV9 622 aaKnown RBP18.48■□□□□ 0.55
CYTH3-206ENST00000478541 BRPF3Q9ULD4 1205 aa18.48■□□□□ 0.55
CYTH3-206ENST00000478541 MYH7BA7E2Y1 1941 aa18.48■□□□□ 0.55
CYTH3-206ENST00000478541 SOX1O00570 391 aaPredicted RBP18.47■□□□□ 0.55
CYTH3-206ENST00000478541 ZBTB43O43298 467 aa18.47■□□□□ 0.55
CYTH3-206ENST00000478541 RGS20O76081 388 aa18.47■□□□□ 0.55
CYTH3-206ENST00000478541 TIMP1P01033 207 aa18.47■□□□□ 0.55
CYTH3-206ENST00000478541 GH1P01241 217 aa18.47■□□□□ 0.55
CYTH3-206ENST00000478541 ARHGAP1Q07960 439 aa18.47■□□□□ 0.55
CYTH3-206ENST00000478541 LY6KQ17RY6 165 aa18.47■□□□□ 0.55
CYTH3-206ENST00000478541 KCNV1Q6PIU1 500 aa18.47■□□□□ 0.55
CYTH3-206ENST00000478541 EMID1Q96A84 441 aaPredicted RBP18.47■□□□□ 0.55
CYTH3-206ENST00000478541 MTG1Q9BT17 334 aaPredicted RBP18.47■□□□□ 0.55
CYTH3-206ENST00000478541 MEIS2O14770 477 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 MYL3P08590 195 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 MYCLP12524 364 aaPredicted RBP18.46■□□□□ 0.55
CYTH3-206ENST00000478541 CCND2P30279 289 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 GPR153Q6NV75 609 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 BLOC1S2Q6QNY1 142 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 FCHSD1Q86WN1 690 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 IL31RAQ8NI17 732 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 CUL5Q93034 780 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
CYTH3-206ENST00000478541 AGXT2Q9BYV1 514 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 MRVI1Q9Y6F6 885 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 CNTNAP5Q8WYK1 1306 aa18.46■□□□□ 0.55
CYTH3-206ENST00000478541 KLF18A0A0U1RQI7 1052 aa18.45■□□□□ 0.54
CYTH3-206ENST00000478541 STAM2O75886 525 aa18.45■□□□□ 0.54
CYTH3-206ENST00000478541 TGFB3P10600 412 aa18.45■□□□□ 0.54
CYTH3-206ENST00000478541 PSMA5P28066 241 aa18.45■□□□□ 0.54
CYTH3-206ENST00000478541 PSMC6P62333 389 aa18.45■□□□□ 0.54
CYTH3-206ENST00000478541 FUT2Q10981 343 aa18.45■□□□□ 0.54
CYTH3-206ENST00000478541 RTN1Q16799 776 aa18.45■□□□□ 0.54
CYTH3-206ENST00000478541 MFSD5Q6N075 450 aa18.45■□□□□ 0.54
CYTH3-206ENST00000478541 CCDC82Q8N4S0 544 aa18.45■□□□□ 0.54
CYTH3-206ENST00000478541 MMP3P08254 477 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 CPA1P15085 419 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 RPS6KB1P23443 525 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 FGD1P98174 961 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 FPGSQ05932 587 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 LAMC2Q13753 1193 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 USP17L6PQ6QN14 398 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 Q6ZUG5 572 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 TEX2Q8IWB9 1127 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 SMARCC2Q8TAQ2 1214 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 AFG1LQ8WV93 481 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 LRCH3Q96II8 777 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 ALDH8A1Q9H2A2 487 aaPredicted RBP18.44■□□□□ 0.54
CYTH3-206ENST00000478541 PSTPIP2Q9H939 334 aa18.44■□□□□ 0.54
CYTH3-206ENST00000478541 FAM217BQ9NTX9 383 aaPredicted RBP18.44■□□□□ 0.54
CYTH3-206ENST00000478541 NID2Q14112 1375 aa18.43■□□□□ 0.54
CYTH3-206ENST00000478541 hCG_1642624A0A1W2PR95 340 aa18.43■□□□□ 0.54
CYTH3-206ENST00000478541 GOLGA8AA7E2F4 631 aa18.43■□□□□ 0.54
CYTH3-206ENST00000478541 GOLGA8BA8MQT2 603 aa18.43■□□□□ 0.54
CYTH3-206ENST00000478541 hCG_1984214I3L0E3 225 aa18.43■□□□□ 0.54
CYTH3-206ENST00000478541 B4GALT4O60513 344 aa18.43■□□□□ 0.54
CYTH3-206ENST00000478541 MRPS9P82933 396 aaKnown RBP18.43■□□□□ 0.54
CYTH3-206ENST00000478541 PTPN11Q06124 597 aaPredicted RBP18.43■□□□□ 0.54
CYTH3-206ENST00000478541 XRRA1Q6P2D8 792 aa18.43■□□□□ 0.54
CYTH3-206ENST00000478541 ZNF713Q8N859 430 aaPredicted RBP18.43■□□□□ 0.54
CYTH3-206ENST00000478541 INPP4AQ96PE3 977 aaPredicted RBP18.43■□□□□ 0.54
CYTH3-206ENST00000478541 USP26Q9BXU7 913 aa18.43■□□□□ 0.54
CYTH3-206ENST00000478541 LAMA2P24043 3122 aaKnown RBP18.42■□□□□ 0.54
CYTH3-206ENST00000478541 CCDC196A0A1B0GTZ2 297 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 CDC27P30260 824 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 ICAM3P32942 547 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 SHHQ15465 462 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 NBPF20Q3BBV1 942 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 GNPTABQ3T906 1256 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 C9orf50Q5SZB4 431 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 MYSM1Q5VVJ2 828 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 PCNX4Q63HM2 1172 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 PPP1R18Q6NYC8 613 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 NFRKBQ6P4R8 1299 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 DHX37Q8IY37 1157 aaKnown RBP18.42■□□□□ 0.54
CYTH3-206ENST00000478541 PPTC7Q8NI37 304 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 BRF1Q92994 677 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 TRPV6Q9H1D0 765 aa18.42■□□□□ 0.54
CYTH3-206ENST00000478541 SUPT20HL2P0C7V6 817 aa18.41■□□□□ 0.54
CYTH3-206ENST00000478541 HOXD8P13378 290 aaPredicted RBP18.41■□□□□ 0.54
CYTH3-206ENST00000478541 CASTP20810 708 aaKnown RBP18.41■□□□□ 0.54
CYTH3-206ENST00000478541 METAP2P50579 478 aaKnown RBP eCLIP18.41■□□□□ 0.54
CYTH3-206ENST00000478541 EPHB4P54760 987 aa18.41■□□□□ 0.54
CYTH3-206ENST00000478541 EVCP57679 992 aa18.41■□□□□ 0.54
CYTH3-206ENST00000478541 SP2Q02086 613 aa18.41■□□□□ 0.54
CYTH3-206ENST00000478541 APOBRQ0VD83 1088 aa18.41■□□□□ 0.54
CYTH3-206ENST00000478541 DGKDQ16760 1214 aa18.41■□□□□ 0.54
CYTH3-206ENST00000478541 CELF3Q5SZQ8 465 aaKnown RBP18.41■□□□□ 0.54
CYTH3-206ENST00000478541 WWC2Q6AWC2 1192 aa18.41■□□□□ 0.54
CYTH3-206ENST00000478541 HEATR3Q7Z4Q2 680 aa18.41■□□□□ 0.54
CYTH3-206ENST00000478541 TMEM199Q8N511 208 aa18.41■□□□□ 0.54
CYTH3-206ENST00000478541 GPKOWQ92917 476 aaPredicted RBP eCLIP18.41■□□□□ 0.54
CYTH3-206ENST00000478541 GGPS1O95749 300 aa18.4■□□□□ 0.54
CYTH3-206ENST00000478541 UBA1P22314 1058 aaKnown RBP18.4■□□□□ 0.54
CYTH3-206ENST00000478541 PPIGQ13427 754 aaKnown RBP eCLIP18.4■□□□□ 0.54
CYTH3-206ENST00000478541 RUFY3Q7L099 469 aa18.4■□□□□ 0.54
CYTH3-206ENST00000478541 KAT2BQ92831 832 aa18.4■□□□□ 0.54
CYTH3-206ENST00000478541 NOC4LQ9BVI4 516 aaKnown RBP18.4■□□□□ 0.54
CYTH3-206ENST00000478541 PPP1R12CQ9BZL4 782 aa18.4■□□□□ 0.54
CYTH3-206ENST00000478541 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms