RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 PDLIM7Q9NR12 457 aa17.36■□□□□ 0.37
SNX21-210ENST00000478230 BRPF3Q9ULD4 1205 aa17.36■□□□□ 0.37
SNX21-210ENST00000478230 ALPK3Q96L96 1907 aa17.36■□□□□ 0.37
SNX21-210ENST00000478230 BAZ2BQ9UIF8 2168 aaKnown RBP17.35■□□□□ 0.37
SNX21-210ENST00000478230 KIAA0355O15063 1070 aa17.35■□□□□ 0.37
SNX21-210ENST00000478230 MYL3P08590 195 aa17.35■□□□□ 0.37
SNX21-210ENST00000478230 SUPT20HL2P0C7V6 817 aa17.35■□□□□ 0.37
SNX21-210ENST00000478230 MDM2Q00987 491 aaPredicted RBP17.35■□□□□ 0.37
SNX21-210ENST00000478230 PPP1R18Q6NYC8 613 aa17.35■□□□□ 0.37
SNX21-210ENST00000478230 HEATR3Q7Z4Q2 680 aa17.35■□□□□ 0.37
SNX21-210ENST00000478230 RAB11FIP4Q86YS3 637 aa17.35■□□□□ 0.37
SNX21-210ENST00000478230 DHX37Q8IY37 1157 aaKnown RBP17.35■□□□□ 0.37
SNX21-210ENST00000478230 AGXT2Q9BYV1 514 aa17.35■□□□□ 0.37
SNX21-210ENST00000478230 ZSWIM6Q9HCJ5 1215 aa17.35■□□□□ 0.37
SNX21-210ENST00000478230 V9GY48 417 aaPredicted RBP17.35■□□□□ 0.37
SNX21-210ENST00000478230 LCTP09848 1927 aa17.35■□□□□ 0.37
SNX21-210ENST00000478230 MKI67P46013 3256 aaKnown RBP17.34■□□□□ 0.37
SNX21-210ENST00000478230 SPDYE3A6NKU9 549 aa17.34■□□□□ 0.37
SNX21-210ENST00000478230 FOSP01100 380 aaPredicted RBP17.34■□□□□ 0.37
SNX21-210ENST00000478230 APOBRQ0VD83 1088 aa17.34■□□□□ 0.37
SNX21-210ENST00000478230 COL9A3Q14050 684 aaPredicted RBP17.34■□□□□ 0.37
SNX21-210ENST00000478230 LY6KQ17RY6 165 aa17.34■□□□□ 0.37
SNX21-210ENST00000478230 MCTP2Q6DN12 878 aa17.34■□□□□ 0.37
SNX21-210ENST00000478230 NLRX1Q86UT6 975 aa17.34■□□□□ 0.37
SNX21-210ENST00000478230 TDHQ8IZJ6 230 aa17.34■□□□□ 0.37
SNX21-210ENST00000478230 CMTR1Q8N1G2 835 aaKnown RBP17.34■□□□□ 0.37
SNX21-210ENST00000478230 SLC43A3Q8NBI5 491 aa17.34■□□□□ 0.37
SNX21-210ENST00000478230 CCDC12Q8WUD4 166 aaPredicted RBP17.34■□□□□ 0.37
SNX21-210ENST00000478230 EMID1Q96A84 441 aaPredicted RBP17.34■□□□□ 0.37
SNX21-210ENST00000478230 DDX41Q9UJV9 622 aaKnown RBP17.34■□□□□ 0.37
SNX21-210ENST00000478230 NAPAP54920 295 aa17.33■□□□□ 0.36
SNX21-210ENST00000478230 ANAPC15P60006 121 aa17.33■□□□□ 0.36
SNX21-210ENST00000478230 IRX5P78411 483 aaPredicted RBP17.33■□□□□ 0.36
SNX21-210ENST00000478230 PURAQ00577 322 aaKnown RBP17.33■□□□□ 0.36
SNX21-210ENST00000478230 PTPN11Q06124 597 aaPredicted RBP17.33■□□□□ 0.36
SNX21-210ENST00000478230 FAAP100Q0VG06 881 aa17.33■□□□□ 0.36
SNX21-210ENST00000478230 DGKDQ16760 1214 aa17.33■□□□□ 0.36
SNX21-210ENST00000478230 PCNX4Q63HM2 1172 aa17.33■□□□□ 0.36
SNX21-210ENST00000478230 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
SNX21-210ENST00000478230 GIMAP8Q8ND71 665 aaPredicted RBP17.33■□□□□ 0.36
SNX21-210ENST00000478230 CDHR1Q96JP9 859 aa17.33■□□□□ 0.36
SNX21-210ENST00000478230 LRRC37A2A6NM11 1700 aa17.33■□□□□ 0.36
SNX21-210ENST00000478230 FRMPD4Q14CM0 1322 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 CNTNAP5Q8WYK1 1306 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 MEIS2O14770 477 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 CPA1P15085 419 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 EVCP57679 992 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 NEDD9Q14511 834 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 NFRKBQ6P4R8 1299 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 USP17L6PQ6QN14 398 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 FAM126BQ8IXS8 530 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 PPTC7Q8NI37 304 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 KATNAL1Q9BW62 490 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 MLXIPQ9HAP2 919 aa17.32■□□□□ 0.36
SNX21-210ENST00000478230 TRIM43BA6NCK2 446 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 MAFGO15525 162 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 FIBPO43427 364 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 PPFIA4O75335 1185 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 ARIH2O95376 493 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 TIMP1P01033 207 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 CDC27P30260 824 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 ICAM3P32942 547 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 ADCY7P51828 1080 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 ARHGAP1Q07960 439 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 TMEM63BQ5T3F8 832 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 TMEM199Q8N511 208 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 AFG1LQ8WV93 481 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 COPS5Q92905 334 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 BADQ92934 168 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 TRIM43Q96BQ3 446 aaPredicted RBP17.31■□□□□ 0.36
SNX21-210ENST00000478230 ZNF274Q96GC6 653 aaPredicted RBP17.31■□□□□ 0.36
SNX21-210ENST00000478230 RIC8AQ9NPQ8 531 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 PDRG1Q9NUG6 133 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 BARHL2Q9NY43 387 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 CEP290O15078 2479 aa17.31■□□□□ 0.36
SNX21-210ENST00000478230 NID2Q14112 1375 aa17.3■□□□□ 0.36
SNX21-210ENST00000478230 hCG_1642624A0A1W2PR95 340 aa17.3■□□□□ 0.36
SNX21-210ENST00000478230 PRPF3O43395 683 aaKnown RBP17.3■□□□□ 0.36
SNX21-210ENST00000478230 CD4P01730 458 aa17.3■□□□□ 0.36
SNX21-210ENST00000478230 ADD1P35611 737 aaKnown RBP17.3■□□□□ 0.36
SNX21-210ENST00000478230 FXR1P51114 621 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNX21-210ENST00000478230 FPGSQ05932 587 aa17.3■□□□□ 0.36
SNX21-210ENST00000478230 FUT2Q10981 343 aa17.3■□□□□ 0.36
SNX21-210ENST00000478230 PPIGQ13427 754 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNX21-210ENST00000478230 ANKRD1Q15327 319 aa17.3■□□□□ 0.36
SNX21-210ENST00000478230 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
SNX21-210ENST00000478230 CELF3Q5SZQ8 465 aaKnown RBP17.3■□□□□ 0.36
SNX21-210ENST00000478230 SH3RF1Q7Z6J0 888 aa17.3■□□□□ 0.36
SNX21-210ENST00000478230 TRIM22Q8IYM9 498 aa17.3■□□□□ 0.36
SNX21-210ENST00000478230 INPP4AQ96PE3 977 aaPredicted RBP17.3■□□□□ 0.36
SNX21-210ENST00000478230 FAM217BQ9NTX9 383 aaPredicted RBP17.3■□□□□ 0.36
SNX21-210ENST00000478230 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 CPLX1O14810 134 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 GGPS1O95749 300 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 MMP3P08254 477 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 SCG2P13521 617 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 GNA11P29992 359 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 PDIA3P30101 505 aaKnown RBP17.29■□□□□ 0.36
SNX21-210ENST00000478230 PSMC6P62333 389 aa17.29■□□□□ 0.36
SNX21-210ENST00000478230 AP3B2Q13367 1082 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms