RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 GH1P01241 217 aa23.83■■□□□ 1.41
PDLIM1-202ENST00000477757 NHLH1Q02575 133 aa23.83■■□□□ 1.41
PDLIM1-202ENST00000477757 CSPP1Q1MSJ5 1256 aa23.83■■□□□ 1.41
PDLIM1-202ENST00000477757 TRAF7Q6Q0C0 670 aa23.83■■□□□ 1.41
PDLIM1-202ENST00000477757 NEK9Q8TD19 979 aa23.83■■□□□ 1.41
PDLIM1-202ENST00000477757 CRBNQ96SW2 442 aa23.83■■□□□ 1.41
PDLIM1-202ENST00000477757 C17orf80Q9BSJ5 609 aa23.83■■□□□ 1.41
PDLIM1-202ENST00000477757 DCXO43602 365 aa23.82■■□□□ 1.4
PDLIM1-202ENST00000477757 FGRP09769 529 aa23.82■■□□□ 1.4
PDLIM1-202ENST00000477757 PDHBP11177 359 aa23.82■■□□□ 1.4
PDLIM1-202ENST00000477757 TRIM71Q2Q1W2 868 aaKnown RBP23.82■■□□□ 1.4
PDLIM1-202ENST00000477757 FAM117BQ6P1L5 589 aa23.82■■□□□ 1.4
PDLIM1-202ENST00000477757 MRPL38Q96DV4 380 aaKnown RBP23.82■■□□□ 1.4
PDLIM1-202ENST00000477757 KCNH6Q9H252 994 aa23.82■■□□□ 1.4
PDLIM1-202ENST00000477757 INSL6Q9Y581 213 aa23.82■■□□□ 1.4
PDLIM1-202ENST00000477757 COL4A6Q14031 1691 aa23.81■■□□□ 1.4
PDLIM1-202ENST00000477757 CASTP20810 708 aaKnown RBP23.81■■□□□ 1.4
PDLIM1-202ENST00000477757 PTK7Q13308 1070 aa23.81■■□□□ 1.4
PDLIM1-202ENST00000477757 MBTPS1Q14703 1052 aa23.81■■□□□ 1.4
PDLIM1-202ENST00000477757 TIGD5Q53EQ6 642 aa23.81■■□□□ 1.4
PDLIM1-202ENST00000477757 RGS22Q8NE09 1264 aa23.81■■□□□ 1.4
PDLIM1-202ENST00000477757 PI4K2BQ8TCG2 481 aa23.81■■□□□ 1.4
PDLIM1-202ENST00000477757 DCTPP1Q9H773 170 aa23.81■■□□□ 1.4
PDLIM1-202ENST00000477757 HDAC6Q9UBN7 1215 aa23.81■■□□□ 1.4
PDLIM1-202ENST00000477757 ZNF543Q08ER8 600 aa23.8■■□□□ 1.4
PDLIM1-202ENST00000477757 MKRN4PQ13434 485 aaPredicted RBP23.8■■□□□ 1.4
PDLIM1-202ENST00000477757 PTPROQ16827 1216 aa23.8■■□□□ 1.4
PDLIM1-202ENST00000477757 LY6KQ17RY6 165 aa23.8■■□□□ 1.4
PDLIM1-202ENST00000477757 C7orf31Q8N865 590 aa23.8■■□□□ 1.4
PDLIM1-202ENST00000477757 SP7Q8TDD2 431 aaPredicted RBP23.8■■□□□ 1.4
PDLIM1-202ENST00000477757 CTNNA3Q9UI47 895 aa23.8■■□□□ 1.4
PDLIM1-202ENST00000477757 TRIOO75962 3097 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 POTEB3A0JP26 581 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 F2P00734 622 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 HTRA4P83105 476 aaPredicted RBP23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 COL19A1Q14993 1142 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 DGKDQ16760 1214 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 ZNF618Q5T7W0 954 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 POTEBQ6S5H4 581 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 WNT8BQ93098 351 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 EMID1Q96A84 441 aaPredicted RBP23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 KATNAL1Q9BW62 490 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 MAF1Q9H063 256 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 TCP11L1Q9NUJ3 509 aa23.79■■□□□ 1.4
PDLIM1-202ENST00000477757 MICAL3Q7RTP6 2002 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 H3BQ06 376 aaPredicted RBP23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 LGR5O75473 907 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 SNHG28P0DPA3 235 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 PSEN2P49810 448 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 ZP2Q05996 745 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 VPS53Q5VIR6 699 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 SEPT14Q6ZU15 432 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 CHST3Q7LGC8 479 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 FBXL18Q96ME1 805 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 PRKAG3Q9UGI9 489 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 ZNF318Q5VUA4 2279 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 KIAA1217Q5T5P2 1943 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 EMSYQ7Z589 1322 aa23.78■■□□□ 1.4
PDLIM1-202ENST00000477757 HAS3O00219 553 aa23.77■■□□□ 1.4
PDLIM1-202ENST00000477757 AMHP03971 560 aa23.77■■□□□ 1.4
PDLIM1-202ENST00000477757 MFSD10Q14728 455 aa23.77■■□□□ 1.4
PDLIM1-202ENST00000477757 USH1GQ495M9 461 aa23.77■■□□□ 1.4
PDLIM1-202ENST00000477757 PABPC5Q96DU9 382 aaKnown RBP23.77■■□□□ 1.4
PDLIM1-202ENST00000477757 SAMD11Q96NU1 681 aa23.77■■□□□ 1.4
PDLIM1-202ENST00000477757 TOMM22Q9NS69 142 aa23.77■■□□□ 1.4
PDLIM1-202ENST00000477757 FAM50BQ9Y247 325 aa23.77■■□□□ 1.4
PDLIM1-202ENST00000477757 ZNF286BP0CG31 522 aa23.76■■□□□ 1.39
PDLIM1-202ENST00000477757 ALX1Q15699 326 aa23.76■■□□□ 1.39
PDLIM1-202ENST00000477757 KIAA0753Q2KHM9 967 aa23.76■■□□□ 1.39
PDLIM1-202ENST00000477757 EPC2Q52LR7 807 aa23.76■■□□□ 1.39
PDLIM1-202ENST00000477757 MYOCDQ8IZQ8 938 aa23.76■■□□□ 1.39
PDLIM1-202ENST00000477757 NSUN6Q8TEA1 469 aaKnown RBP23.76■■□□□ 1.39
PDLIM1-202ENST00000477757 ALG1Q9BT22 464 aa23.76■■□□□ 1.39
PDLIM1-202ENST00000477757 RBAK-RBAKDNI3L0D1 243 aa23.75■■□□□ 1.39
PDLIM1-202ENST00000477757 RRP12Q5JTH9 1297 aaKnown RBP23.75■■□□□ 1.39
PDLIM1-202ENST00000477757 BANK1Q8NDB2 785 aa23.75■■□□□ 1.39
PDLIM1-202ENST00000477757 PPTC7Q8NI37 304 aa23.75■■□□□ 1.39
PDLIM1-202ENST00000477757 SYTL5Q8TDW5 730 aaPredicted RBP23.75■■□□□ 1.39
PDLIM1-202ENST00000477757 IWS1Q96ST2 819 aa23.75■■□□□ 1.39
PDLIM1-202ENST00000477757 COL20A1Q9P218 1284 aa23.75■■□□□ 1.39
PDLIM1-202ENST00000477757 C19orf67A6NJJ6 358 aa23.74■■□□□ 1.39
PDLIM1-202ENST00000477757 H3BNC9 293 aa23.74■■□□□ 1.39
PDLIM1-202ENST00000477757 HOXD8P13378 290 aaPredicted RBP23.74■■□□□ 1.39
PDLIM1-202ENST00000477757 STXBP2Q15833 593 aa23.74■■□□□ 1.39
PDLIM1-202ENST00000477757 C20orf194Q5TEA3 1177 aa23.74■■□□□ 1.39
PDLIM1-202ENST00000477757 DBF4BQ8NFT6 615 aa23.74■■□□□ 1.39
PDLIM1-202ENST00000477757 TAAR1Q96RJ0 339 aa23.74■■□□□ 1.39
PDLIM1-202ENST00000477757 DDX41Q9UJV9 622 aaKnown RBP23.74■■□□□ 1.39
PDLIM1-202ENST00000477757 TCEAL5Q5H9L2 206 aa23.73■■□□□ 1.39
PDLIM1-202ENST00000477757 GPATCH4Q5T3I0 446 aaKnown RBP23.73■■□□□ 1.39
PDLIM1-202ENST00000477757 ADHFE1Q8IWW8 467 aa23.73■■□□□ 1.39
PDLIM1-202ENST00000477757 OTUD7AQ8TE49 926 aaPredicted RBP23.73■■□□□ 1.39
PDLIM1-202ENST00000477757 TTC14Q96N46 770 aa23.73■■□□□ 1.39
PDLIM1-202ENST00000477757 RMDN3Q96TC7 470 aa23.73■■□□□ 1.39
PDLIM1-202ENST00000477757 ABCB11O95342 1321 aa23.73■■□□□ 1.39
PDLIM1-202ENST00000477757 C5orf42Q9H799 3197 aa23.73■■□□□ 1.39
PDLIM1-202ENST00000477757 ZNF200P98182 395 aaPredicted RBP23.72■■□□□ 1.39
PDLIM1-202ENST00000477757 LAMC2Q13753 1193 aa23.72■■□□□ 1.39
PDLIM1-202ENST00000477757 PLEKHG4Q58EX7 1191 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms