RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 REC8O95072 547 aa25.12■■□□□ 1.61
COL9A3-211ENST00000477612 GH1P01241 217 aa25.12■■□□□ 1.61
COL9A3-211ENST00000477612 ARHGAP1Q07960 439 aa25.12■■□□□ 1.61
COL9A3-211ENST00000477612 MFSD5Q6N075 450 aa25.12■■□□□ 1.61
COL9A3-211ENST00000477612 KCNV1Q6PIU1 500 aa25.12■■□□□ 1.61
COL9A3-211ENST00000477612 CMTR1Q8N1G2 835 aaKnown RBP25.12■■□□□ 1.61
COL9A3-211ENST00000477612 PIBF1Q8WXW3 757 aa25.12■■□□□ 1.61
COL9A3-211ENST00000477612 RBM28Q9NW13 759 aaKnown RBP25.12■■□□□ 1.61
COL9A3-211ENST00000477612 BRPF3Q9ULD4 1205 aa25.12■■□□□ 1.61
COL9A3-211ENST00000477612 SNX14Q9Y5W7 946 aa25.12■■□□□ 1.61
COL9A3-211ENST00000477612 MEIS2O14770 477 aa25.11■■□□□ 1.61
COL9A3-211ENST00000477612 RCAN1P53805 252 aa25.11■■□□□ 1.61
COL9A3-211ENST00000477612 PSMC6P62333 389 aa25.11■■□□□ 1.61
COL9A3-211ENST00000477612 SHHQ15465 462 aa25.11■■□□□ 1.61
COL9A3-211ENST00000477612 MICU3Q86XE3 530 aa25.11■■□□□ 1.61
COL9A3-211ENST00000477612 FBXL16Q8N461 479 aa25.11■■□□□ 1.61
COL9A3-211ENST00000477612 TCEANC2Q96MN5 208 aa25.11■■□□□ 1.61
COL9A3-211ENST00000477612 MYL3P08590 195 aa25.1■■□□□ 1.61
COL9A3-211ENST00000477612 TGFB3P10600 412 aa25.1■■□□□ 1.61
COL9A3-211ENST00000477612 MYCLP12524 364 aaPredicted RBP25.1■■□□□ 1.61
COL9A3-211ENST00000477612 FPGSQ05932 587 aa25.1■■□□□ 1.61
COL9A3-211ENST00000477612 C9orf50Q5SZB4 431 aa25.1■■□□□ 1.61
COL9A3-211ENST00000477612 FCHSD1Q86WN1 690 aa25.1■■□□□ 1.61
COL9A3-211ENST00000477612 RAB11FIP4Q86YS3 637 aa25.1■■□□□ 1.61
COL9A3-211ENST00000477612 IL31RAQ8NI17 732 aa25.1■■□□□ 1.61
COL9A3-211ENST00000477612 MRVI1Q9Y6F6 885 aa25.1■■□□□ 1.61
COL9A3-211ENST00000477612 ZBTB43O43298 467 aa25.09■■□□□ 1.61
COL9A3-211ENST00000477612 STAM2O75886 525 aa25.09■■□□□ 1.61
COL9A3-211ENST00000477612 CCND2P30279 289 aa25.09■■□□□ 1.61
COL9A3-211ENST00000477612 EPHB4P54760 987 aa25.09■■□□□ 1.61
COL9A3-211ENST00000477612 AFG1LQ8WV93 481 aa25.09■■□□□ 1.61
COL9A3-211ENST00000477612 AGXT2Q9BYV1 514 aa25.09■■□□□ 1.61
COL9A3-211ENST00000477612 ALDH8A1Q9H2A2 487 aaPredicted RBP25.09■■□□□ 1.61
COL9A3-211ENST00000477612 B4GALT4O60513 344 aa25.08■■□□□ 1.61
COL9A3-211ENST00000477612 MMP3P08254 477 aa25.08■■□□□ 1.61
COL9A3-211ENST00000477612 PTPN11Q06124 597 aaPredicted RBP25.08■■□□□ 1.61
COL9A3-211ENST00000477612 FUT2Q10981 343 aa25.08■■□□□ 1.61
COL9A3-211ENST00000477612 LAMC2Q13753 1193 aa25.08■■□□□ 1.61
COL9A3-211ENST00000477612 NFRKBQ6P4R8 1299 aa25.08■■□□□ 1.61
COL9A3-211ENST00000477612 CNTNAP5Q8WYK1 1306 aa25.08■■□□□ 1.6
COL9A3-211ENST00000477612 MRPS9P82933 396 aaKnown RBP25.07■■□□□ 1.6
COL9A3-211ENST00000477612 USP17L6PQ6QN14 398 aa25.07■■□□□ 1.6
COL9A3-211ENST00000477612 CCDC82Q8N4S0 544 aa25.07■■□□□ 1.6
COL9A3-211ENST00000477612 CUL5Q93034 780 aa25.07■■□□□ 1.6
COL9A3-211ENST00000477612 TRPV6Q9H1D0 765 aa25.07■■□□□ 1.6
COL9A3-211ENST00000477612 FAM217BQ9NTX9 383 aaPredicted RBP25.07■■□□□ 1.6
COL9A3-211ENST00000477612 HOXD8P13378 290 aaPredicted RBP25.06■■□□□ 1.6
COL9A3-211ENST00000477612 CASTP20810 708 aaKnown RBP25.06■■□□□ 1.6
COL9A3-211ENST00000477612 ICAM3P32942 547 aa25.06■■□□□ 1.6
COL9A3-211ENST00000477612 RTN1Q16799 776 aa25.06■■□□□ 1.6
COL9A3-211ENST00000477612 NBPF20Q3BBV1 942 aa25.06■■□□□ 1.6
COL9A3-211ENST00000477612 MYSM1Q5VVJ2 828 aa25.06■■□□□ 1.6
COL9A3-211ENST00000477612 XRRA1Q6P2D8 792 aa25.06■■□□□ 1.6
COL9A3-211ENST00000477612 BLOC1S2Q6QNY1 142 aa25.06■■□□□ 1.6
COL9A3-211ENST00000477612 TEX2Q8IWB9 1127 aa25.06■■□□□ 1.6
COL9A3-211ENST00000477612 SMARCC2Q8TAQ2 1214 aa25.06■■□□□ 1.6
COL9A3-211ENST00000477612 JAKMIP1Q96N16 626 aaKnown RBP25.06■■□□□ 1.6
COL9A3-211ENST00000477612 INPP4AQ96PE3 977 aaPredicted RBP25.06■■□□□ 1.6
COL9A3-211ENST00000477612 DOCK5Q9H7D0 1870 aa25.06■■□□□ 1.6
COL9A3-211ENST00000477612 KLF18A0A0U1RQI7 1052 aa25.05■■□□□ 1.6
COL9A3-211ENST00000477612 SUPT20HL2P0C7V6 817 aa25.05■■□□□ 1.6
COL9A3-211ENST00000477612 CPA1P15085 419 aa25.05■■□□□ 1.6
COL9A3-211ENST00000477612 SP2Q02086 613 aa25.05■■□□□ 1.6
COL9A3-211ENST00000477612 PPIGQ13427 754 aaKnown RBP eCLIP25.05■■□□□ 1.61e-23■■■□□ 18
COL9A3-211ENST00000477612 Q6ZUG5 572 aa25.05■■□□□ 1.6
COL9A3-211ENST00000477612 DHX37Q8IY37 1157 aaKnown RBP25.05■■□□□ 1.6
COL9A3-211ENST00000477612 TMEM199Q8N511 208 aa25.05■■□□□ 1.6
COL9A3-211ENST00000477612 PPTC7Q8NI37 304 aa25.05■■□□□ 1.6
COL9A3-211ENST00000477612 NOC4LQ9BVI4 516 aaKnown RBP25.05■■□□□ 1.6
COL9A3-211ENST00000477612 PSTPIP2Q9H939 334 aa25.05■■□□□ 1.6
COL9A3-211ENST00000477612 TRIP12Q14669 1992 aaPredicted RBP25.04■■□□□ 1.6
COL9A3-211ENST00000477612 hCG_1642624A0A1W2PR95 340 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 CENPBP07199 599 aaPredicted RBP25.04■■□□□ 1.6
COL9A3-211ENST00000477612 RPS6KB1P23443 525 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 PSMA5P28066 241 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 DGKDQ16760 1214 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 CELF3Q5SZQ8 465 aaKnown RBP25.04■■□□□ 1.6
COL9A3-211ENST00000477612 PCNX4Q63HM2 1172 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 C16orf59Q7L2K0 433 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 SESTD1Q86VW0 696 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 KAT2BQ92831 832 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 USP26Q9BXU7 913 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 PPP1R12CQ9BZL4 782 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 HIPK3Q9H422 1215 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 NID2Q14112 1375 aa25.04■■□□□ 1.6
COL9A3-211ENST00000477612 CDC27P30260 824 aa25.03■■□□□ 1.6
COL9A3-211ENST00000477612 CYP2C18P33260 490 aa25.03■■□□□ 1.6
COL9A3-211ENST00000477612 GNPTABQ3T906 1256 aa25.03■■□□□ 1.6
COL9A3-211ENST00000477612 GOLGA8AA7E2F4 631 aa25.02■■□□□ 1.6
COL9A3-211ENST00000477612 GOLGA8BA8MQT2 603 aa25.02■■□□□ 1.6
COL9A3-211ENST00000477612 SPATA31C2B4DYI2 1134 aa25.02■■□□□ 1.6
COL9A3-211ENST00000477612 hCG_1984214I3L0E3 225 aa25.02■■□□□ 1.6
COL9A3-211ENST00000477612 PPFIA4O75335 1185 aa25.02■■□□□ 1.6
COL9A3-211ENST00000477612 CSF2RAP15509 400 aa25.02■■□□□ 1.6
COL9A3-211ENST00000477612 FAM109BQ6ICB4 259 aaPredicted RBP25.02■■□□□ 1.6
COL9A3-211ENST00000477612 ZNF713Q8N859 430 aaPredicted RBP25.02■■□□□ 1.6
COL9A3-211ENST00000477612 GPKOWQ92917 476 aaPredicted RBP eCLIP25.02■■□□□ 1.6
COL9A3-211ENST00000477612 ZFP91Q96JP5 570 aaPredicted RBP25.02■■□□□ 1.6
COL9A3-211ENST00000477612 TRMT13Q9NUP7 481 aaKnown RBP25.02■■□□□ 1.6
COL9A3-211ENST00000477612 HAS3O00219 553 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms