RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 CCNI2Q6ZMN8 369 aaPredicted RBP20.09■□□□□ 0.81
CCM2-209ENST00000477605 COG1Q8WTW3 980 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 RAD54LQ92698 747 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 TSG101Q99816 390 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 SH2D4AQ9H788 454 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 PCDHA13Q9Y5I0 950 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 GAKO14976 1311 aa20.09■□□□□ 0.81
CCM2-209ENST00000477605 SRGAP2O75044 1071 aa20.08■□□□□ 0.81
CCM2-209ENST00000477605 N4BP1O75113 896 aaKnown RBP20.08■□□□□ 0.81
CCM2-209ENST00000477605 RHBDL3P58872 404 aa20.08■□□□□ 0.81
CCM2-209ENST00000477605 KRT79Q5XKE5 535 aa20.08■□□□□ 0.81
CCM2-209ENST00000477605 PPP4R3AQ6IN85 833 aa20.08■□□□□ 0.81
CCM2-209ENST00000477605 IFIH1Q9BYX4 1025 aaKnown RBP20.08■□□□□ 0.81
CCM2-209ENST00000477605 NUCKS1Q9H1E3 243 aaKnown RBP20.08■□□□□ 0.81
CCM2-209ENST00000477605 JADE2Q9NQC1 790 aa20.08■□□□□ 0.81
CCM2-209ENST00000477605 CCNL1Q9UK58 526 aaPredicted RBP20.08■□□□□ 0.81
CCM2-209ENST00000477605 PJA2O43164 708 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 SLC26A4O43511 780 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 TCP1P17987 556 aaKnown RBP20.07■□□□□ 0.8
CCM2-209ENST00000477605 EHHADHQ08426 723 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 NFIXQ14938 502 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 CCDC96Q2M329 555 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 TMEM119Q4V9L6 283 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 CCDC155Q8N6L0 562 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 GOLGA6L1Q8N7Z2 621 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 CPVLQ9H3G5 476 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 HPCAL4Q9UM19 191 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 TFR2Q9UP52 801 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 USP17L5A8MUK1 530 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 ZNF263O14978 683 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 SNHG28P0DPA3 235 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 PDHBP11177 359 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 CAPN2P17655 700 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 CYP27A1Q02318 531 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 CNBD1Q8NA66 436 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 AKT1S1Q96B36 256 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 ALS2CR12Q96Q35 445 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 VAT1LQ9HCJ6 419 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 ARHGAP20Q9P2F6 1191 aa20.07■□□□□ 0.8
CCM2-209ENST00000477605 SSU72P8A0A1W2PR75 194 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 RFC4P35249 363 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 KIF11P52732 1056 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 GPSM2P81274 684 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 MAPK8IP2Q13387 824 aaPredicted RBP20.06■□□□□ 0.8
CCM2-209ENST00000477605 C2CD5Q86YS7 1000 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 CAPZA3Q96KX2 299 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 NAP1L4Q99733 375 aaKnown RBP20.06■□□□□ 0.8
CCM2-209ENST00000477605 DDX60LQ5H9U9 1706 aaKnown RBP20.06■□□□□ 0.8
CCM2-209ENST00000477605 MACROD2A1Z1Q3 448 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 TRAPPC3LQ5T215 181 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 CREG2Q8IUH2 290 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 SYN2Q92777 582 aaPredicted RBP20.06■□□□□ 0.8
CCM2-209ENST00000477605 SPON1Q9HCB6 807 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 TMEM260Q9NX78 707 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 MTMR4Q9NYA4 1195 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 DUSP10Q9Y6W6 482 aa20.06■□□□□ 0.8
CCM2-209ENST00000477605 TNRC6CQ9HCJ0 1690 aaKnown RBP20.05■□□□□ 0.8
CCM2-209ENST00000477605 C10orf71Q711Q0 1435 aa20.05■□□□□ 0.8
CCM2-209ENST00000477605 EIF4A3P38919 411 aaKnown RBP20.05■□□□□ 0.8
CCM2-209ENST00000477605 TNNT3P45378 269 aaPredicted RBP20.05■□□□□ 0.8
CCM2-209ENST00000477605 RAD51AP2Q09MP3 1159 aa20.05■□□□□ 0.8
CCM2-209ENST00000477605 LRRC55Q6ZSA7 311 aa20.05■□□□□ 0.8
CCM2-209ENST00000477605 RNF10Q8N5U6 811 aaKnown RBP20.05■□□□□ 0.8
CCM2-209ENST00000477605 EEF2KMTQ96G04 330 aa20.05■□□□□ 0.8
CCM2-209ENST00000477605 DEF6Q9H4E7 631 aa20.05■□□□□ 0.8
CCM2-209ENST00000477605 TSKSQ9UJT2 592 aa20.05■□□□□ 0.8
CCM2-209ENST00000477605 GGA1Q9UJY5 639 aa20.05■□□□□ 0.8
CCM2-209ENST00000477605 PDE2AO00408 941 aaPredicted RBP20.04■□□□□ 0.8
CCM2-209ENST00000477605 SYF2O95926 243 aaKnown RBP20.04■□□□□ 0.8
CCM2-209ENST00000477605 GCFC2P16383 781 aaKnown RBP20.04■□□□□ 0.8
CCM2-209ENST00000477605 SNX29Q8TEQ0 813 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 BAP1Q92560 729 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 RPGRQ92834 1020 aaKnown RBP20.04■□□□□ 0.8
CCM2-209ENST00000477605 UBA5Q9GZZ9 404 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 MMRN2Q9H8L6 949 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 HYOU1Q9Y4L1 999 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 MYH1P12882 1939 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 MYO3BQ8WXR4 1341 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 IGKV6D-41A0A0C4DH26 115 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 PNMA6FA0A0J9YX94 578 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 AKR1B10O60218 316 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 UFL1O94874 794 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 GNA14O95837 355 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 CRY2Q49AN0 593 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 PDXDC1Q6P996 788 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 DDX12PQ92771 950 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 HPS3Q969F9 1004 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 CRACR2AQ9BSW2 395 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 FAM207AQ9NSI2 230 aaPredicted RBP20.04■□□□□ 0.8
CCM2-209ENST00000477605 PODXL2Q9NZ53 605 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 RNF14Q9UBS8 474 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 FAM184BQ9ULE4 1060 aa20.04■□□□□ 0.8
CCM2-209ENST00000477605 SLC37A4O43826 429 aa20.03■□□□□ 0.8
CCM2-209ENST00000477605 RNF40O75150 1001 aa20.03■□□□□ 0.8
CCM2-209ENST00000477605 PRPF6O94906 941 aaKnown RBP20.03■□□□□ 0.8
CCM2-209ENST00000477605 ZBTB7AO95365 584 aa20.03■□□□□ 0.8
CCM2-209ENST00000477605 ASTE1Q2TB18 679 aaPredicted RBP20.03■□□□□ 0.8
CCM2-209ENST00000477605 HYIQ5T013 277 aa20.03■□□□□ 0.8
CCM2-209ENST00000477605 MYOCDQ8IZQ8 938 aa20.03■□□□□ 0.8
CCM2-209ENST00000477605 CEP63Q96MT8 703 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms