RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 NKRFO15226 690 aaKnown RBP eCLIP15.02■□□□□ -0
TOP3A-205ENST00000477508 TGFB3P10600 412 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 MYCLP12524 364 aaPredicted RBP15.02■□□□□ -0
TOP3A-205ENST00000477508 TRIM29Q14134 588 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 TTLL4Q14679 1199 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 GNPTABQ3T906 1256 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 PCNX4Q63HM2 1172 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 EEPD1Q7L9B9 569 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 FBXO16Q8IX29 292 aaPredicted RBP15.02■□□□□ -0
TOP3A-205ENST00000477508 DAGLBQ8NCG7 672 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 ALG1Q9BT22 464 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 PCDHA4Q9UN74 947 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 Q9Y3F1 56 aa15.02■□□□□ -0
TOP3A-205ENST00000477508 FDPSP14324 419 aaKnown RBP15.01□□□□□ -0.01
TOP3A-205ENST00000477508 SOX10P56693 466 aa15.01□□□□□ -0.01
TOP3A-205ENST00000477508 ST3GAL1Q11201 340 aa15.01□□□□□ -0.01
TOP3A-205ENST00000477508 DUSP28Q4G0W2 176 aa15.01□□□□□ -0.01
TOP3A-205ENST00000477508 RNF180Q86T96 592 aa15.01□□□□□ -0.01
TOP3A-205ENST00000477508 FAM184AQ8NB25 1140 aa15.01□□□□□ -0.01
TOP3A-205ENST00000477508 WDR11Q9BZH6 1224 aa15.01□□□□□ -0.01
TOP3A-205ENST00000477508 BRMS1Q9HCU9 246 aa15.01□□□□□ -0.01
TOP3A-205ENST00000477508 XPNPEP3Q9NQH7 507 aa15.01□□□□□ -0.01
TOP3A-205ENST00000477508 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.01□□□□□ -0.01
TOP3A-205ENST00000477508 JAK2O60674 1132 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 CD2BP2O95400 341 aaKnown RBP15□□□□□ -0.01
TOP3A-205ENST00000477508 EN2P19622 333 aaPredicted RBP15□□□□□ -0.01
TOP3A-205ENST00000477508 SREBF1P36956 1147 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 ADCYAP1R1P41586 468 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 NLRX1Q86UT6 975 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 BLIDQ8IZY5 108 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 CDHR1Q96JP9 859 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 AIFM3Q96NN9 605 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 PHF20Q9BVI0 1012 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 ANO3Q9BYT9 981 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 AP5M1Q9H0R1 490 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 PDGFCQ9NRA1 345 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 DDX49Q9Y6V7 483 aaKnown RBP15□□□□□ -0.01
TOP3A-205ENST00000477508 BRCA2P51587 3418 aa15□□□□□ -0.01
TOP3A-205ENST00000477508 DNM1LO00429 736 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 MAFGO15525 162 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 TXNP10599 105 aaKnown RBP14.99□□□□□ -0.01
TOP3A-205ENST00000477508 GJA9P57773 515 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 NKX3-2P78367 333 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 MRPS9P82933 396 aaKnown RBP14.99□□□□□ -0.01
TOP3A-205ENST00000477508 JAKMIP3Q5VZ66 844 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 CCDC62Q6P9F0 684 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 SEPT14Q6ZU15 432 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 IL31RAQ8NI17 732 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 SNX21Q969T3 373 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 SHISA4Q96DD7 197 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 INPP4AQ96PE3 977 aaPredicted RBP14.99□□□□□ -0.01
TOP3A-205ENST00000477508 UPF3AQ9H1J1 476 aaKnown RBP14.99□□□□□ -0.01
TOP3A-205ENST00000477508 GNEQ9Y223 722 aaKnown RBP14.99□□□□□ -0.01
TOP3A-205ENST00000477508 MRVI1Q9Y6F6 885 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 LRRC37A2A6NM11 1700 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 KIAA1217Q5T5P2 1943 aa14.99□□□□□ -0.01
TOP3A-205ENST00000477508 KBTBD13C9JR72 458 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 FIBPO43427 364 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 CYP3A4P08684 503 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 SMPD1P17405 629 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 ICAM3P32942 547 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 RGS19P49795 217 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 SAFBQ15424 915 aaKnown RBP eCLIP14.98□□□□□ -0.01
TOP3A-205ENST00000477508 BRDTQ58F21 947 aaPredicted RBP14.98□□□□□ -0.01
TOP3A-205ENST00000477508 ANO1Q5XXA6 986 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 KRT25Q7Z3Z0 450 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 GIMAP8Q8ND71 665 aaPredicted RBP14.98□□□□□ -0.01
TOP3A-205ENST00000477508 GPRASP2Q96D09 838 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 TSEN34Q9BSV6 310 aaKnown RBP14.98□□□□□ -0.01
TOP3A-205ENST00000477508 TMEM260Q9NX78 707 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 KCNJ14Q9UNX9 436 aa14.98□□□□□ -0.01
TOP3A-205ENST00000477508 SYNRGQ9UMZ2 1314 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.97□□□□□ -0.01
TOP3A-205ENST00000477508 SPATA31C2B4DYI2 1134 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 ZEB2O60315 1214 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 ADAMTS4O75173 837 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 FARP2O94887 1054 aaPredicted RBP14.97□□□□□ -0.01
TOP3A-205ENST00000477508 CST5P28325 142 aaPredicted RBP14.97□□□□□ -0.01
TOP3A-205ENST00000477508 KRT2P35908 639 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 ZNF76P36508 570 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 USP11P51784 963 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 ARHGAP4P98171 946 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 CACNB1Q02641 598 aaPredicted RBP14.97□□□□□ -0.01
TOP3A-205ENST00000477508 CUL4AQ13619 759 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 LRRC41Q15345 812 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 NIPA1Q7RTP0 329 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 NECAB2Q7Z6G3 386 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 TLK2Q86UE8 772 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 PCSK9Q8NBP7 692 aaKnown RBP14.97□□□□□ -0.01
TOP3A-205ENST00000477508 KLHDC9Q8NEP7 349 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 C8orf76Q96K31 380 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 DDX41Q9UJV9 622 aaKnown RBP14.97□□□□□ -0.01
TOP3A-205ENST00000477508 SMC3Q9UQE7 1217 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 UBIAD1Q9Y5Z9 338 aa14.97□□□□□ -0.01
TOP3A-205ENST00000477508 FRMPD3Q5JV73 1810 aa14.96□□□□□ -0.01
TOP3A-205ENST00000477508 CCDC194A0A1B0GVG4 234 aa14.96□□□□□ -0.01
TOP3A-205ENST00000477508 K7ELQ4 463 aaPredicted RBP14.96□□□□□ -0.01
TOP3A-205ENST00000477508 M0R2N6 131 aa14.96□□□□□ -0.01
TOP3A-205ENST00000477508 DYNC1LI2O43237 492 aaPredicted RBP14.96□□□□□ -0.01
TOP3A-205ENST00000477508 ADCY6O43306 1168 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms