RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 ZNF500O60304 480 aaPredicted RBP7.52□□□□□ -1.21
LDB3-206ENST00000477489 CCNT1O60563 726 aaKnown RBP7.52□□□□□ -1.21
LDB3-206ENST00000477489 VEGFAP15692 232 aaPredicted RBP7.52□□□□□ -1.21
LDB3-206ENST00000477489 ZNF75DP51815 510 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 USP14P54578 494 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 GSDMDP57764 484 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 ATP2B2Q01814 1243 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 DPYDQ12882 1025 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 PNOCQ13519 176 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 KCNB1Q14721 858 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 QRICH1Q2TAL8 776 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 DPCR1Q3MIW9 517 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 PDXDC2PQ6P474 469 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 CNNM4Q6P4Q7 775 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 C11orf57Q6ZUT1 292 aaPredicted RBP7.52□□□□□ -1.21
LDB3-206ENST00000477489 FBXO11Q86XK2 927 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 SLFN12Q8IYM2 578 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 GPC2Q8N158 579 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 IGSF22Q8N9C0 903 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 TBCKQ8TEA7 893 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 DHX58Q96C10 678 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 PAGE5Q96GU1 130 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 MTMR9Q96QG7 549 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 TRIM5Q9C035 493 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 RANBP17Q9H2T7 1088 aaKnown RBP7.52□□□□□ -1.21
LDB3-206ENST00000477489 VEZTQ9HBM0 779 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 VAT1LQ9HCJ6 419 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 DISC1Q9NRI5 854 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 BCS1LQ9Y276 419 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 PCDHA1Q9Y5I3 950 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 PCDHAC2Q9Y5I4 1007 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 MYH7BA7E2Y1 1941 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 ABCB11O95342 1321 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 KDM3AQ9Y4C1 1321 aa7.52□□□□□ -1.21
LDB3-206ENST00000477489 SBF1O95248 1867 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 CLRN2A0PK11 232 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 USP17L10C9JJH3 530 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 H7C1D1 291 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 WDR46O15213 610 aaKnown RBP7.51□□□□□ -1.21
LDB3-206ENST00000477489 GDF11O95390 407 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 CYP3A4P08684 503 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 PRKCSHP14314 528 aaPredicted RBP7.51□□□□□ -1.21
LDB3-206ENST00000477489 LMNB1P20700 586 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 CIITAP33076 1130 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 STAT6P42226 847 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 RGS19P49795 217 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 GHRHRQ02643 423 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 GRIN1Q05586 938 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 SPAG1Q07617 926 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 CALCRLQ16602 461 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 LETM2Q2VYF4 491 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 Q4G0T1 1027 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 COBLL1Q53SF7 1204 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 RRAGBQ5VZM2 374 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 TTBK2Q6IQ55 1244 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 FOXR2Q6PJQ5 311 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 ARHGAP27Q6ZUM4 889 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 KCTD1Q719H9 257 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 NLRP7Q8WX94 980 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 PIBF1Q8WXW3 757 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 CALML4Q96GE6 196 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 EPSTI1Q96J88 318 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 TEPSINQ96N21 525 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 PHOX2BQ99453 314 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 WDR18Q9BV38 432 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 KIAA1683Q9H0B3 1180 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 AS3MTQ9HBK9 375 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 KBTBD4Q9NVX7 518 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 MAN1B1Q9UKM7 699 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 PRR12Q9ULL5 1215 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 MTMR7Q9Y216 660 aa7.51□□□□□ -1.21
LDB3-206ENST00000477489 MRPL11Q9Y3B7 192 aaKnown RBP7.51□□□□□ -1.21
LDB3-206ENST00000477489 RBBP6Q7Z6E9 1792 aaKnown RBP7.51□□□□□ -1.21
LDB3-206ENST00000477489 ZC3H4Q9UPT8 1303 aaKnown RBP7.51□□□□□ -1.21
LDB3-206ENST00000477489 LOXHD1Q8IVV2 1947 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 SPDYE3A6NKU9 549 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 PHF20L1A8MW92 1017 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 TMEM232C9JQI7 657 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 RNF223E7ERA6 249 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 TULP1O00294 542 aaPredicted RBP7.5□□□□□ -1.21
LDB3-206ENST00000477489 WNT7AO00755 349 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 NRDCO43847 1150 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 PPP1R11O60927 126 aaPredicted RBP7.5□□□□□ -1.21
LDB3-206ENST00000477489 MUTP22033 750 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 SREBF1P36956 1147 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 CTCFP49711 727 aaPredicted RBP7.5□□□□□ -1.21
LDB3-206ENST00000477489 GMPSP49915 693 aaPredicted RBP7.5□□□□□ -1.21
LDB3-206ENST00000477489 RASA3Q14644 834 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 NCAPHQ15003 741 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 LAPTM4AQ15012 233 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 IL17AQ16552 155 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 KIF4BQ2VIQ3 1234 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 NOM1Q5C9Z4 860 aaKnown RBP7.5□□□□□ -1.21
LDB3-206ENST00000477489 HYIQ5T013 277 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 ZNF658Q5TYW1 1059 aaPredicted RBP7.5□□□□□ -1.21
LDB3-206ENST00000477489 C9orf131Q5VYM1 1079 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 JAKMIP3Q5VZ66 844 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 KRT79Q5XKE5 535 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 Q6ZNB5 142 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 CABP7Q86V35 215 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms