RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 IGFBP4P22692 258 aa15.25■□□□□ 0.03
SRSF3-203ENST00000477442 HOXA13P31271 388 aaPredicted RBP15.25■□□□□ 0.03
SRSF3-203ENST00000477442 CCDC85BQ15834 202 aaPredicted RBP15.25■□□□□ 0.03
SRSF3-203ENST00000477442 GDF6Q6KF10 455 aaPredicted RBP15.25■□□□□ 0.03
SRSF3-203ENST00000477442 STOX1Q6ZVD7 989 aa15.25■□□□□ 0.03
SRSF3-203ENST00000477442 HOMER1Q86YM7 354 aa15.25■□□□□ 0.03
SRSF3-203ENST00000477442 IL31RAQ8NI17 732 aa15.25■□□□□ 0.03
SRSF3-203ENST00000477442 MTMR8Q96EF0 704 aa15.25■□□□□ 0.03
SRSF3-203ENST00000477442 IWS1Q96ST2 819 aa15.25■□□□□ 0.03
SRSF3-203ENST00000477442 AMNQ9BXJ7 453 aa15.25■□□□□ 0.03
SRSF3-203ENST00000477442 DDX41Q9UJV9 622 aaKnown RBP15.25■□□□□ 0.03
SRSF3-203ENST00000477442 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
SRSF3-203ENST00000477442 RGS20O76081 388 aa15.24■□□□□ 0.03
SRSF3-203ENST00000477442 ARHGEF15O94989 841 aa15.24■□□□□ 0.03
SRSF3-203ENST00000477442 MYCLP12524 364 aaPredicted RBP15.24■□□□□ 0.03
SRSF3-203ENST00000477442 HSD17B4P51659 736 aa15.24■□□□□ 0.03
SRSF3-203ENST00000477442 TET1Q8NFU7 2136 aa15.24■□□□□ 0.03
SRSF3-203ENST00000477442 DHX38Q92620 1227 aaKnown RBP15.24■□□□□ 0.03
SRSF3-203ENST00000477442 PIGSQ96S52 555 aa15.24■□□□□ 0.03
SRSF3-203ENST00000477442 NOD1Q9Y239 953 aa15.24■□□□□ 0.03
SRSF3-203ENST00000477442 PCDHA1Q9Y5I3 950 aa15.24■□□□□ 0.03
SRSF3-203ENST00000477442 TANC1Q9C0D5 1861 aa15.24■□□□□ 0.03
SRSF3-203ENST00000477442 REV3LO60673 3130 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 RFXAPO00287 272 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 IFIT3O14879 490 aaKnown RBP15.23■□□□□ 0.03
SRSF3-203ENST00000477442 ZBTB5O15062 677 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 CYTH3O43739 400 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 ZNF286BP0CG31 522 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 PTPN11Q06124 597 aaPredicted RBP15.23■□□□□ 0.03
SRSF3-203ENST00000477442 GRM4Q14833 912 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 GPNMBQ14956 572 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 PTGISQ16647 500 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 PPP2R2DQ66LE6 453 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 RETREG2Q8NC44 543 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 PIBF1Q8WXW3 757 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 GPKOWQ92917 476 aaPredicted RBP eCLIP15.23■□□□□ 0.032e-7■■□□□ 13.9
SRSF3-203ENST00000477442 PDCD2LQ9BRP1 358 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 ALG1Q9BT22 464 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 FTOQ9C0B1 505 aaKnown RBP eCLIP15.23■□□□□ 0.03
SRSF3-203ENST00000477442 CERS4Q9HA82 394 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 HDAC6Q9UBN7 1215 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 PCDHA11Q9Y5I1 949 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 MRVI1Q9Y6F6 885 aa15.23■□□□□ 0.03
SRSF3-203ENST00000477442 BAZ2BQ9UIF8 2168 aaKnown RBP15.23■□□□□ 0.03
SRSF3-203ENST00000477442 TRIP12Q14669 1992 aaPredicted RBP15.22■□□□□ 0.03
SRSF3-203ENST00000477442 E7EWF7 191 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 PITPNM1O00562 1244 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 EIF3JO75822 258 aaKnown RBP15.22■□□□□ 0.03
SRSF3-203ENST00000477442 CA3P07451 260 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 PFKMP08237 780 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 ANTXR2P58335 489 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 ZNF200P98182 395 aaPredicted RBP15.22■□□□□ 0.03
SRSF3-203ENST00000477442 GHRHRQ02643 423 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 TRDNQ13061 729 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 COL9A3Q14050 684 aaPredicted RBP15.22■□□□□ 0.03
SRSF3-203ENST00000477442 TCTN1Q2MV58 587 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 WNT8BQ93098 351 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 MAF1Q9H063 256 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 BCAS3Q9H6U6 928 aa15.22■□□□□ 0.03
SRSF3-203ENST00000477442 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
SRSF3-203ENST00000477442 EPOPA6NHQ4 379 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 SGSM2O43147 1006 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 CASTP20810 708 aaKnown RBP15.21■□□□□ 0.03
SRSF3-203ENST00000477442 PSEN2P49810 448 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 SP2Q02086 613 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 BFSP2Q13515 415 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 HIC1Q14526 733 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 PGM5Q15124 567 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 DGKDQ16760 1214 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 SPRED2Q7Z698 418 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 TMCO2Q7Z6W1 182 aaPredicted RBP15.21■□□□□ 0.03
SRSF3-203ENST00000477442 FCHSD1Q86WN1 690 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 DHX37Q8IY37 1157 aaKnown RBP15.21■□□□□ 0.03
SRSF3-203ENST00000477442 RUFY2Q8WXA3 655 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 RIOX1Q9H6W3 641 aa15.21■□□□□ 0.03
SRSF3-203ENST00000477442 MYH7BA7E2Y1 1941 aa15.21■□□□□ 0.02
SRSF3-203ENST00000477442 F2P00734 622 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 ACTN1P12814 892 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 RFC2P35250 354 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 TROAPQ12815 778 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 WTAPQ15007 396 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 HSDL1Q3SXM5 330 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 TMEM67Q5HYA8 995 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 RALYLQ86SE5 291 aaKnown RBP15.2■□□□□ 0.02
SRSF3-203ENST00000477442 VSIG10LQ86VR7 867 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 SESTD1Q86VW0 696 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 MICALL1Q8N3F8 863 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 EMID1Q96A84 441 aaPredicted RBP15.2■□□□□ 0.02
SRSF3-203ENST00000477442 MYL10Q9BUA6 226 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 GTF2IRD1Q9UHL9 959 aa15.2■□□□□ 0.02
SRSF3-203ENST00000477442 PTPRSQ13332 1948 aa15.19■□□□□ 0.02
SRSF3-203ENST00000477442 TTC28Q96AY4 2481 aa15.19■□□□□ 0.02
SRSF3-203ENST00000477442 HAS3O00219 553 aa15.19■□□□□ 0.02
SRSF3-203ENST00000477442 GGPS1O95749 300 aa15.19■□□□□ 0.02
SRSF3-203ENST00000477442 UBA1P22314 1058 aaKnown RBP15.19■□□□□ 0.02
SRSF3-203ENST00000477442 LAMC2Q13753 1193 aa15.19■□□□□ 0.02
SRSF3-203ENST00000477442 MFSD10Q14728 455 aa15.19■□□□□ 0.02
SRSF3-203ENST00000477442 KIAA0753Q2KHM9 967 aa15.19■□□□□ 0.02
SRSF3-203ENST00000477442 TJAP1Q5JTD0 557 aa15.19■□□□□ 0.02
SRSF3-203ENST00000477442 MYSM1Q5VVJ2 828 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms