RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 RMDN3Q96TC7 470 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 POLR3EQ9NVU0 708 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 TSKSQ9UJT2 592 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 RCOR1Q9UKL0 485 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 GJD2Q9UKL4 321 aa10.57□□□□□ -0.72
PGK1-204ENST00000477335 NOL7Q9UMY1 257 aaKnown RBP10.57□□□□□ -0.72
PGK1-204ENST00000477335 TCHHQ07283 1943 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 CCNT1O60563 726 aaKnown RBP10.56□□□□□ -0.72
PGK1-204ENST00000477335 GADD45BO75293 160 aaPredicted RBP10.56□□□□□ -0.72
PGK1-204ENST00000477335 RGS20O76081 388 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 ITGB5P18084 799 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 MARCKSP29966 332 aaPredicted RBP10.56□□□□□ -0.72
PGK1-204ENST00000477335 MAPK4P31152 587 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 KRT85P78386 507 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 LACTBP83111 547 aaPredicted RBP10.56□□□□□ -0.72
PGK1-204ENST00000477335 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 KCTD2Q14681 263 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 SLC39A14Q15043 492 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 ARHGEF16Q5VV41 709 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 PCNX4Q63HM2 1172 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 MCTP2Q6DN12 878 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 ABRAQ8N0Z2 381 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 TMEM87AQ8NBN3 555 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 HAS1Q92839 578 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 MAF1Q9H063 256 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 FBXO2Q9UK22 296 aaPredicted RBP10.56□□□□□ -0.72
PGK1-204ENST00000477335 ATP6V1DQ9Y5K8 247 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 UBIAD1Q9Y5Z9 338 aa10.56□□□□□ -0.72
PGK1-204ENST00000477335 SLC15A5A6NIM6 579 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 YEATS4O95619 227 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 NR3C2P08235 984 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 ARP10275 920 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 MYCLP12524 364 aaPredicted RBP10.55□□□□□ -0.72
PGK1-204ENST00000477335 MCM4P33991 863 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 USP11P51784 963 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 ATP2C1P98194 919 aaPredicted RBP10.55□□□□□ -0.72
PGK1-204ENST00000477335 PTGDRQ13258 359 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 Q4G0T1 1027 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 PRR16Q569H4 304 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 ATL3Q6DD88 541 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 PPP4R3AQ6IN85 833 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 MOXD1Q6UVY6 613 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 VSIG10LQ86VR7 867 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 ETNPPLQ8TBG4 499 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 MORC4Q8TE76 937 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 NSUN6Q8TEA1 469 aaKnown RBP10.55□□□□□ -0.72
PGK1-204ENST00000477335 FAM212AQ96EL1 285 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 CLIC6Q96NY7 704 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 MTMR9Q96QG7 549 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 KCNMB3Q9NPA1 279 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 LMBRD1Q9NUN5 540 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 FLRT1Q9NZU1 646 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 DDX25Q9UHL0 483 aaKnown RBP10.55□□□□□ -0.72
PGK1-204ENST00000477335 GABRQQ9UN88 632 aa10.55□□□□□ -0.72
PGK1-204ENST00000477335 GPR25O00155 361 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 MEIS1O00470 390 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 SPTLC2O15270 562 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 MSH4O15457 936 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 MGAMO43451 1857 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 NEMFO60524 1076 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 IGHA2P01877 340 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 PTGS1P23219 599 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 CCND2P30279 289 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 PSMC4P43686 418 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 SP3Q02447 781 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 MAP2K5Q13163 448 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 STK38Q15208 465 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 CCL14Q16627 93 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 AXDND1Q5T1B0 1012 aaPredicted RBP10.54□□□□□ -0.72
PGK1-204ENST00000477335 TMEM63BQ5T3F8 832 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 DNERQ8NFT8 737 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 CD99L2Q8TCZ2 262 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 SPATA32Q96LK8 384 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 MXRA8Q9BRK3 442 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 WDR11Q9BZH6 1224 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 KATNBL1Q9H079 304 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 BCAS3Q9H6U6 928 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 WBP1LQ9NX94 342 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 SAGE1Q9NXZ1 904 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 CFAP45Q9UL16 551 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 TELO2Q9Y4R8 837 aa10.54□□□□□ -0.72
PGK1-204ENST00000477335 MORC2Q9Y6X9 1032 aaPredicted RBP10.54□□□□□ -0.72
PGK1-204ENST00000477335 ZNFX1Q9P2E3 1918 aaKnown RBP10.54□□□□□ -0.72
PGK1-204ENST00000477335 DOCK3Q8IZD9 2030 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 TNPO2O14787 897 aaKnown RBP10.53□□□□□ -0.72
PGK1-204ENST00000477335 STRNO43815 780 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 PRPF40AO75400 957 aaKnown RBP10.53□□□□□ -0.72
PGK1-204ENST00000477335 SNAI1O95863 264 aaPredicted RBP10.53□□□□□ -0.72
PGK1-204ENST00000477335 OR52Z1P0C646 297 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 GCFC2P16383 781 aaKnown RBP10.53□□□□□ -0.72
PGK1-204ENST00000477335 PRKCZQ05513 592 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 ITGB3BPQ13352 177 aaPredicted RBP10.53□□□□□ -0.72
PGK1-204ENST00000477335 NFKBIBQ15653 356 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 CEP55Q53EZ4 464 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 SPECC1Q5M775 1068 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 USP49Q70CQ1 688 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 PLA2G4DQ86XP0 818 aa10.53□□□□□ -0.72
PGK1-204ENST00000477335 CCAR1Q8IX12 1150 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms