RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZMYM1Q5SVZ6 1142 aa13.4□□□□□ -0.26
BRCA1-213ENST00000476777 PTCRAQ6ISU1 281 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-213ENST00000476777 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
BRCA1-213ENST00000476777 UIMC1Q96RL1 719 aa13.4□□□□□ -0.26
BRCA1-213ENST00000476777 GPCPD1Q9NPB8 672 aa13.4□□□□□ -0.26
BRCA1-213ENST00000476777 PNMA2Q9UL42 364 aa13.4□□□□□ -0.26
BRCA1-213ENST00000476777 PTPRZ1P23471 2315 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-213ENST00000476777 SPTBN4Q9H254 2564 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 ORC4O43929 436 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 EFCAB14O75071 495 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 FGRP09769 529 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 MRE11P49959 708 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 FAM117BQ6P1L5 589 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 TRAF7Q6Q0C0 670 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 TMEM47Q9BQJ4 181 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 DCTPP1Q9H773 170 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 ANAPC4Q9UJX5 808 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 USP34Q70CQ2 3546 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 MICAL3Q7RTP6 2002 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
BRCA1-213ENST00000476777 ZFHX2Q9C0A1 2572 aaPredicted RBP13.38□□□□□ -0.27
BRCA1-213ENST00000476777 B4DLN1 442 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 GH1P01241 217 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 PDHBP11177 359 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 TOP1P11387 765 aaKnown RBP13.38□□□□□ -0.27
BRCA1-213ENST00000476777 MRPL12P52815 198 aaKnown RBP13.38□□□□□ -0.27
BRCA1-213ENST00000476777 NHLH1Q02575 133 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 IKBKEQ14164 716 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 MBTPS1Q14703 1052 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 LY6KQ17RY6 165 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 TRIM71Q2Q1W2 868 aaKnown RBP13.38□□□□□ -0.27
BRCA1-213ENST00000476777 FBXO22Q8NEZ5 403 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 C17orf80Q9BSJ5 609 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 FSD1Q9BTV5 496 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 HDAC6Q9UBN7 1215 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 TECTAO75443 2155 aa13.38□□□□□ -0.27
BRCA1-213ENST00000476777 RIF1Q5UIP0 2472 aaKnown RBP13.37□□□□□ -0.27
BRCA1-213ENST00000476777 POTEB3A0JP26 581 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-213ENST00000476777 DCXO43602 365 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 CASTP20810 708 aaKnown RBP13.37□□□□□ -0.27
BRCA1-213ENST00000476777 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-213ENST00000476777 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 PUS10Q3MIT2 529 aaKnown RBP13.37□□□□□ -0.27
BRCA1-213ENST00000476777 POTEBQ6S5H4 581 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
BRCA1-213ENST00000476777 SEPT14Q6ZU15 432 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 C7orf31Q8N865 590 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 RGS22Q8NE09 1264 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 PI4K2BQ8TCG2 481 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 WNT8BQ93098 351 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 MRPL38Q96DV4 380 aaKnown RBP13.37□□□□□ -0.27
BRCA1-213ENST00000476777 FBXL18Q96ME1 805 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 CRBNQ96SW2 442 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 TCP11L1Q9NUJ3 509 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 INSL6Q9Y581 213 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 TTC41PQ6P2S7 1318 aa13.37□□□□□ -0.27
BRCA1-213ENST00000476777 HTRA4P83105 476 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-213ENST00000476777 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
BRCA1-213ENST00000476777 PTK7Q13308 1070 aa13.36□□□□□ -0.27
BRCA1-213ENST00000476777 DGKDQ16760 1214 aa13.36□□□□□ -0.27
BRCA1-213ENST00000476777 ZNF618Q5T7W0 954 aa13.36□□□□□ -0.27
BRCA1-213ENST00000476777 VPS53Q5VIR6 699 aa13.36□□□□□ -0.27
BRCA1-213ENST00000476777 CHST3Q7LGC8 479 aa13.36□□□□□ -0.27
BRCA1-213ENST00000476777 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-213ENST00000476777 KCNH6Q9H252 994 aa13.36□□□□□ -0.27
BRCA1-213ENST00000476777 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
BRCA1-213ENST00000476777 KIAA1217Q5T5P2 1943 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 HAS3O00219 553 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 LGR5O75473 907 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 F2P00734 622 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 SNHG28P0DPA3 235 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 PSEN2P49810 448 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 ZNF200P98182 395 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-213ENST00000476777 ZP2Q05996 745 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 COL19A1Q14993 1142 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 ALX1Q15699 326 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 PTPROQ16827 1216 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 USH1GQ495M9 461 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 TIGD5Q53EQ6 642 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 C20orf194Q5TEA3 1177 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 SYTL5Q8TDW5 730 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-213ENST00000476777 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-213ENST00000476777 TBC1D5Q92609 795 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-213ENST00000476777 TAAR1Q96RJ0 339 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 ALG1Q9BT22 464 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 COL20A1Q9P218 1284 aa13.35□□□□□ -0.27
BRCA1-213ENST00000476777 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
BRCA1-213ENST00000476777 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 AMHP03971 560 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 ZNF286BP0CG31 522 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 HIC1Q14526 733 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 MFSD10Q14728 455 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 KIAA0753Q2KHM9 967 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms