RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 CCDC17Q96LX7 622 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 TRIM34Q9BYJ4 488 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 VEZTQ9HBM0 779 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 TMEM260Q9NX78 707 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 EPN1Q9Y6I3 576 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-208ENST00000476724 TTC26A0AVF1 554 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 RNF225M0QZC1 329 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-208ENST00000476724 DMTNQ08495 405 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 MTMR14Q8NCE2 650 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 ZBED3Q96IU2 234 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-208ENST00000476724 CDK5RAP3Q96JB5 506 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 NAP1L4Q99733 375 aaKnown RBP18.37■□□□□ 0.53
TMEM53-208ENST00000476724 IRX2Q9BZI1 471 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-208ENST00000476724 JMJD4Q9H9V9 463 aa18.37■□□□□ 0.53
TMEM53-208ENST00000476724 LTBP3Q9NS15 1303 aa18.36■□□□□ 0.53
TMEM53-208ENST00000476724 CTAGE9A4FU28 777 aa18.36■□□□□ 0.53
TMEM53-208ENST00000476724 WNT10BO00744 389 aa18.36■□□□□ 0.53
TMEM53-208ENST00000476724 EGFRP00533 1210 aa18.36■□□□□ 0.53
TMEM53-208ENST00000476724 MRPL12P52815 198 aaKnown RBP18.36■□□□□ 0.53
TMEM53-208ENST00000476724 STK4Q13043 487 aa18.36■□□□□ 0.53
TMEM53-208ENST00000476724 GLT8D2Q9H1C3 349 aa18.36■□□□□ 0.53
TMEM53-208ENST00000476724 SCAF8Q9UPN6 1271 aaKnown RBP18.36■□□□□ 0.53
TMEM53-208ENST00000476724 NDUFA10O95299 355 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 GRB10Q13322 594 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 SEPT2Q15019 361 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 ANKRD40Q6AI12 368 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 UNC13DQ70J99 1090 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 SRGAP1Q7Z6B7 1085 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 ACRBPQ8NEB7 543 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 FAM151AQ8WW52 585 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 GPCPD1Q9NPB8 672 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 MYOZ2Q9NPC6 264 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 PES1O00541 588 aaKnown RBP18.35■□□□□ 0.53
TMEM53-208ENST00000476724 ZRANB2O95218 330 aaKnown RBP eCLIP18.35■□□□□ 0.53
TMEM53-208ENST00000476724 FGFR1OPO95684 399 aaKnown RBP18.35■□□□□ 0.53
TMEM53-208ENST00000476724 GCFC2P16383 781 aaKnown RBP18.35■□□□□ 0.53
TMEM53-208ENST00000476724 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
TMEM53-208ENST00000476724 KIF4BQ2VIQ3 1234 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 KRT79Q5XKE5 535 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 LARP4BQ92615 738 aaKnown RBP18.35■□□□□ 0.53
TMEM53-208ENST00000476724 CUL5Q93034 780 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 TMEM39BQ9GZU3 492 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 PRDM10Q9NQV6 1147 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 BLOC1S4Q9NUP1 217 aa18.35■□□□□ 0.53
TMEM53-208ENST00000476724 ZBTB5O15062 677 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 EEF2P13639 858 aaKnown RBP18.34■□□□□ 0.53
TMEM53-208ENST00000476724 TBC1D8BQ0IIM8 1120 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 PSMD2Q13200 908 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 TNIP1Q15025 636 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 FIGNQ5HY92 759 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 CENPPQ6IPU0 288 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 ZNF662Q6ZS27 426 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 MTMR8Q96EF0 704 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 HAUS4Q9H6D7 363 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 ARHGAP25P42331 645 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 MEA1Q16626 185 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 ABCB5Q2M3G0 1257 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 TEX35Q5T0J7 233 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 RBM26Q5T8P6 1007 aaKnown RBP18.34■□□□□ 0.53
TMEM53-208ENST00000476724 FOXR2Q6PJQ5 311 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 CNOT6LQ96LI5 555 aaKnown RBP18.34■□□□□ 0.53
TMEM53-208ENST00000476724 PNMA5Q96PV4 448 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 ERGIC2Q96RQ1 377 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 NAPGQ99747 312 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-208ENST00000476724 ZNHIT6Q9NWK9 470 aaKnown RBP18.34■□□□□ 0.53
TMEM53-208ENST00000476724 FHOD1Q9Y613 1164 aa18.34■□□□□ 0.53
TMEM53-208ENST00000476724 ABCB11O95342 1321 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 B4DLN1 442 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 SLC37A4O43826 429 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 EDIL3O43854 480 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 TDP2O95551 362 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 FCER1AP12319 257 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 MTIF2P46199 727 aaKnown RBP18.33■□□□□ 0.52
TMEM53-208ENST00000476724 KRT83P78385 493 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 TTBK2Q6IQ55 1244 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 SLC35F6Q8N357 371 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 RAD54LQ92698 747 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 CHP1Q99653 195 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 SLF1Q9BQI6 1058 aa18.33■□□□□ 0.52
TMEM53-208ENST00000476724 NOC4LQ9BVI4 516 aaKnown RBP18.33■□□□□ 0.52
TMEM53-208ENST00000476724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.33■□□□□ 0.52
TMEM53-208ENST00000476724 A0A1W2PQJ5 194 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 FZD9O00144 591 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 SLC26A4O43511 780 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 TRIM21P19474 475 aaKnown RBP18.32■□□□□ 0.52
TMEM53-208ENST00000476724 CHMP4BP1P59074 171 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 FAM193AP78312 1265 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 ZBED6P86452 979 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 FKBP15Q5T1M5 1219 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 GUF1Q8N442 669 aaKnown RBP18.32■□□□□ 0.52
TMEM53-208ENST00000476724 KIAA0895Q8NCT3 520 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 TTYH3Q9C0H2 523 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 KANSL2Q9H9L4 492 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 GJA3Q9Y6H8 435 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 A0A0U1RQJ8 604 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 MYMKA6NI61 221 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms