RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	RANBP2	P49792	3224 aa	Known RBP	11.77	□□□□□ -0.53
CCM2-208	ENST00000476594	KLF18	A0A0U1RQI7	1052 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594		A6NJR5	290 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	SPDYE3	A6NKU9	549 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	PLEKHA8P1	O95397	391 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	RXRA	P19793	462 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	HOXA13	P31271	388 aa	Predicted RBP	11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	PURA	Q00577	322 aa	Known RBP	11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	EXOSC10	Q01780	885 aa	Known RBP	11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	PTPN11	Q06124	597 aa	Predicted RBP	11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	FAAP100	Q0VG06	881 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	PPIG	Q13427	754 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	LAMC2	Q13753	1193 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	PGM5	Q15124	567 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	DGKD	Q16760	1214 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	PPP1R18	Q6NYC8	613 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	FAM126B	Q8IXS8	530 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	DHX37	Q8IY37	1157 aa	Known RBP	11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	RASEF	Q8IZ41	740 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	SRBD1	Q8N5C6	995 aa	Known RBP	11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	BAD	Q92934	168 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	MTIF3	Q9H2K0	278 aa	Known RBP	11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	NOD1	Q9Y239	953 aa		11.76	□□□□□ -0.53
CCM2-208	ENST00000476594	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	TRIM43B	A6NCK2	446 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	PIK3CD	O00329	1044 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	OPLAH	O14841	1288 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	TIMP1	P01033	207 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	METAP2	P50579	478 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	AKAP17A	Q02040	695 aa	Known RBP	11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	ADCK5	Q3MIX3	580 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	FAM47C	Q5HY64	1035 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	NFRKB	Q6P4R8	1299 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	CCDC62	Q6P9F0	684 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	HEATR3	Q7Z4Q2	680 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	NLRX1	Q86UT6	975 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	VSIG10L	Q86VR7	867 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	CCDC82	Q8N4S0	544 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	CCDC155	Q8N6L0	562 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	SLC43A3	Q8NBI5	491 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	KCNB2	Q92953	911 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	EMID1	Q96A84	441 aa	Predicted RBP	11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	CDHR1	Q96JP9	859 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	PSTPIP2	Q9H939	334 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	SNX14	Q9Y5W7	946 aa		11.75	□□□□□ -0.53
CCM2-208	ENST00000476594	NAPA	P54920	295 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	IRX5	P78411	483 aa	Predicted RBP	11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	NEDD9	Q14511	834 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	LY6K	Q17RY6	165 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	SLC35G1	Q2M3R5	365 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	MFSD5	Q6N075	450 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594		Q6ZUG5	572 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	SH3RF1	Q7Z6J0	888 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	RAB11FIP4	Q86YS3	637 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	PPTC7	Q8NI37	304 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	TCEANC2	Q96MN5	208 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	HIPK3	Q9H422	1215 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	MLXIP	Q9HAP2	919 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	DDX41	Q9UJV9	622 aa	Known RBP	11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	TBX21	Q9UL17	535 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	FRMPD4	Q14CM0	1322 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	LTBP2	Q14767	1821 aa		11.74	□□□□□ -0.53
CCM2-208	ENST00000476594	NOP56	O00567	594 aa	Known RBP	11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	FIBP	O43427	364 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	ARIH2	O95376	493 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	FOS	P01100	380 aa	Predicted RBP	11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	CD4	P01730	458 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	MMP3	P08254	477 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	RPS6KB1	P23443	525 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	ARHGAP1	Q07960	439 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	KIAA1217	Q5T5P2	1943 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	PCNX4	Q63HM2	1172 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	MCTP2	Q6DN12	878 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	CPLX2	Q6PUV4	134 aa	Known RBP	11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	CMTR1	Q8N1G2	835 aa	Known RBP	11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	FBXL16	Q8N461	479 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	AFG1L	Q8WV93	481 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	CNTNAP5	Q8WYK1	1306 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	COPS5	Q92905	334 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	BRF1	Q92994	677 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	RNPC3	Q96LT9	517 aa	Known RBP	11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	SPATA33	Q96N06	139 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	PPP1R12C	Q9BZL4	782 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	CYP46A1	Q9Y6A2	500 aa		11.73	□□□□□ -0.53
CCM2-208	ENST00000476594	PPFIA4	O75335	1185 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	GGPS1	O95749	300 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	PFKM	P08237	780 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	ICAM3	P32942	547 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	ADCY7	P51828	1080 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	CHMP4BP1	P59074	171 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	PSMC6	P62333	389 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	BFSP2	Q13515	415 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	NBPF20	Q3BBV1	942 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	TMEM63B	Q5T3F8	832 aa		11.72	□□□□□ -0.53
CCM2-208	ENST00000476594	USP17L6P	Q6QN14	398 aa		11.72	□□□□□ -0.53

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