RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 DDR1Q08345 913 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 KCNB1Q14721 858 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 NAA25Q14CX7 972 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 PARP10Q53GL7 1025 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 CCDC181Q5TID7 509 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 PTF1AQ7RTS3 328 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 KIAA0895Q8NCT3 520 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 HPS3Q969F9 1004 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 TBC1D31Q96DN5 1066 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 NUP88Q99567 741 aaPredicted RBP9.29□□□□□ -0.92
VAPB-205ENST00000476395 ZPR1O75312 459 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 RASSF9O75901 435 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 LONP1P36776 959 aaKnown RBP9.29□□□□□ -0.92
VAPB-205ENST00000476395 STK4Q13043 487 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 LINC00116Q8NCU8 138 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 JAKMIP2Q96AA8 810 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 DYNLL2Q96FJ2 89 aa9.29□□□□□ -0.92
VAPB-205ENST00000476395 MACROD2A1Z1Q3 448 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 B4DLN1 442 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 DNM1LO00429 736 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 KCNQ2O43526 872 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 RTN2O75298 545 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 BMP15O95972 392 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 FCER1AP12319 257 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 NAP1L1P55209 391 aaKnown RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 UBXN1Q04323 297 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 MTA1Q13330 715 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 ANKRD40Q6AI12 368 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 TEX11Q8IYF3 940 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 BLIDQ8IZY5 108 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 DAGLBQ8NCG7 672 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 PROCA1Q8NCQ7 364 aaPredicted RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 AENQ8WTP8 325 aaKnown RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 TPX2Q9ULW0 747 aaKnown RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 PCDHA4Q9UN74 947 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 SAR1BQ9Y6B6 198 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 GREB1LQ9C091 1923 aaPredicted RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 CALM1P0DP23 149 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 CALM2P0DP24 149 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 CALM3P0DP25 149 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 PCP11498 1178 aaKnown RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 LSP1P33241 339 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 SNX1Q13596 522 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 TRADDQ15628 312 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 ZRSR2Q15696 482 aaKnown RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 SLC4A8Q2Y0W8 1093 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 CREG2Q8IUH2 290 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 AMOTL1Q8IY63 956 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 PARD3BQ8TEW8 1205 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 ACSBG1Q96GR2 724 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 CPVLQ9H3G5 476 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 SEMA6BQ9H3T3 888 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 KIF9Q9HAQ2 790 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 ADAMTSL1Q8N6G6 1762 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 USP17L3A6NCW0 530 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 USP17L4A6NCW7 530 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 ENO4A6NNW6 628 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 H7C1D1 291 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 AP1G2O75843 785 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 FAM153BP0C7A2 387 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 HSPA1LP34931 641 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 KCNQ4P56696 695 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 CYP27A1Q02318 531 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 FAM153CQ494X1 144 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 USP17L1Q7RTZ2 530 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 ZNF572Q7Z3I7 529 aaPredicted RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 ZNF473Q8WTR7 871 aaKnown RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 ZIM3Q96PE6 472 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 PLIN2Q99541 437 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 CDCA7Q9BWT1 371 aaPredicted RBP9.28□□□□□ -0.92
VAPB-205ENST00000476395 THAP9Q9H5L6 903 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 FAM153AQ9UHL3 310 aa9.28□□□□□ -0.92
VAPB-205ENST00000476395 KIF13BQ9NQT8 1826 aa9.27□□□□□ -0.92
VAPB-205ENST00000476395 TUBB2AQ13885 445 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 GRM4Q14833 912 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 FAM182BQ5T319 152 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 TUBB2BQ9BVA1 445 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 TRIM6Q9C030 488 aaPredicted RBP9.27□□□□□ -0.93
VAPB-205ENST00000476395 CCSER1Q9C0I3 900 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 VCPKMTQ9H867 229 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 PPANQ9NQ55 473 aaKnown RBP9.27□□□□□ -0.93
VAPB-205ENST00000476395 A1CFQ9NQ94 594 aaKnown RBP9.27□□□□□ -0.93
VAPB-205ENST00000476395 JADE2Q9NQC1 790 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 SIK3Q9Y2K2 1263 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 CAPN6Q9Y6Q1 641 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 SPATA31A1Q5TZJ5 1347 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 QPCTQ16769 361 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 SLC10A5Q5PT55 438 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 CCDC122Q5T0U0 273 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 WLSQ5T9L3 541 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 C12orf60Q5U649 245 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 TBC1D9BQ66K14 1250 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 KRT26Q7Z3Y9 468 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 SLC44A5Q8NCS7 719 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 SH3GLB2Q9NR46 395 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 TFCP2L1Q9NZI6 479 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 ARHGAP20Q9P2F6 1191 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 JAG2Q9Y219 1238 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 STK24Q9Y6E0 443 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms