RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 USP26Q9BXU7 913 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 BACH2Q9BYV9 841 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 CYP4F12Q9HCS2 524 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 C9orf78Q9NZ63 289 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-206ENST00000476045 PTPRFP10586 1907 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 FAM205AQ6ZU69 1335 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 IRS2Q9Y4H2 1338 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 SSC5DA1L4H1 1573 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 DOCK1Q14185 1865 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 HMX2A2RU54 273 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 WNT10BO00744 389 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 ZBTB48P10074 688 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-206ENST00000476045 ADH5P11766 374 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 BMP3P12645 472 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 GSTM4Q03013 218 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 FMR1Q06787 632 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS13D-206ENST00000476045 SLFN5Q08AF3 891 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 GRM2Q14416 872 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 DLGAP5Q15398 846 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 PKN2Q16513 984 aaKnown RBP5.2□□□□□ -1.58
VPS13D-206ENST00000476045 MAP3K11Q16584 847 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 ALDH1L2Q3SY69 923 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 RABL6Q3YEC7 729 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-206ENST00000476045 TTLL5Q6EMB2 1281 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 LDHAL6AQ6ZMR3 332 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 BEND4Q6ZU67 534 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 HOOK2Q96ED9 719 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 ZBED3Q96IU2 234 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-206ENST00000476045 CD209Q9NNX6 404 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 CNNM1Q9NRU3 951 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 SUGT1Q9Y2Z0 365 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 FOCADQ5VW36 1801 aa5.2□□□□□ -1.58
VPS13D-206ENST00000476045 TMEM238LA0A1B0GVL6 79 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 SASH1O94885 1247 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 TGFB1P01137 390 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 CYP11A1P05108 521 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 MAP4P27816 1152 aaKnown RBP5.19□□□□□ -1.58
VPS13D-206ENST00000476045 TNNI2P48788 182 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 FOXO4P98177 505 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 HDLBPQ00341 1268 aaKnown RBP5.19□□□□□ -1.58
VPS13D-206ENST00000476045 SOX4Q06945 474 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-206ENST00000476045 AP3B2Q13367 1082 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 PUM3Q15397 648 aaKnown RBP5.19□□□□□ -1.58
VPS13D-206ENST00000476045 ENOX2Q16206 610 aaKnown RBP5.19□□□□□ -1.58
VPS13D-206ENST00000476045 SUPT20HL1Q3ZLR7 823 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 SGO2Q562F6 1265 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 LMBR1LQ6UX01 489 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 CTU1Q7Z7A3 348 aaKnown RBP5.19□□□□□ -1.58
VPS13D-206ENST00000476045 VPS37DQ86XT2 251 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 DTX1Q86Y01 620 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 KIAA0825Q8IV33 1275 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-206ENST00000476045 GATA6Q92908 595 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 NIF3L1Q9GZT8 377 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 EHD4Q9H223 541 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 ZFYVE1Q9HBF4 777 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 KCNQ5Q9NR82 932 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 TMOD2Q9NZR1 351 aa5.19□□□□□ -1.58
VPS13D-206ENST00000476045 ATAD5Q96QE3 1844 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 MANSC4A6NHS7 340 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 F6X3S4 739 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 SART1O43290 800 aaKnown RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 GAS2O43903 313 aaKnown RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 COBLO75128 1261 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 BCAR3O75815 825 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 MED26O95402 600 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 XRCC5P13010 732 aaKnown RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 KLRK1P26718 216 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 MAOBP27338 520 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 RGS19P49795 217 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 RGS3P49796 1198 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 INHBEP58166 350 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 KIF23Q02241 960 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 FAAP100Q0VG06 881 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 POU4F3Q15319 338 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 NBPF9Q3BBW0 867 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 CAVIN4Q5BKX8 364 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 MFSD14BQ5SR56 506 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 FKBP1CQ5VVH2 108 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 OTUD7BQ6GQQ9 843 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 SLC4A10Q6U841 1118 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 CENPQQ7L2Z9 268 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 JARID2Q92833 1246 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 API5Q9BZZ5 524 aaKnown RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 MCOLN1Q9GZU1 580 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 DEFB129Q9H1M3 183 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 SMC4Q9NTJ3 1288 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 BRCA2P51587 3418 aa5.18□□□□□ -1.58
VPS13D-206ENST00000476045 MKI67P46013 3256 aaKnown RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 ASTN2O75129 1339 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 PDS5AQ29RF7 1337 aaKnown RBP5.18□□□□□ -1.58
VPS13D-206ENST00000476045 MGAMO43451 1857 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 CDK5RAP2Q96SN8 1893 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 LOC285556D6RIA3 1793 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 WDHD1O75717 1129 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-206ENST00000476045 CIAO1O76071 339 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 IFIT1P09914 478 aaKnown RBP5.17□□□□□ -1.58
VPS13D-206ENST00000476045 SLC5A1P13866 664 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 HIBADHP31937 336 aaKnown RBP5.17□□□□□ -1.58
VPS13D-206ENST00000476045 TM4SF4P48230 202 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms