RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PHF20Q9BVI0 1012 aa9.74□□□□□ -0.85
SMC5-203ENST00000475540 AP5M1Q9H0R1 490 aa9.74□□□□□ -0.85
SMC5-203ENST00000475540 CLDND1Q9NY35 253 aa9.74□□□□□ -0.85
SMC5-203ENST00000475540 PCDHA5Q9Y5H7 936 aa9.74□□□□□ -0.85
SMC5-203ENST00000475540 TRBV23-1A0A0A0MS06 115 aa9.73□□□□□ -0.85
SMC5-203ENST00000475540 NCKAP1LP55160 1127 aa9.73□□□□□ -0.85
SMC5-203ENST00000475540 Q8N1Y9 231 aa9.73□□□□□ -0.85
SMC5-203ENST00000475540 ALG3Q92685 438 aa9.73□□□□□ -0.85
SMC5-203ENST00000475540 IRS2Q9Y4H2 1338 aa9.73□□□□□ -0.85
SMC5-203ENST00000475540 BUB1BO60566 1050 aaPredicted RBP9.72□□□□□ -0.85
SMC5-203ENST00000475540 LINC00310P59036 64 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 NTRK3Q16288 839 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 ZNF385BQ569K4 471 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 ZC3H12BQ5HYM0 836 aaKnown RBP9.72□□□□□ -0.85
SMC5-203ENST00000475540 FAM209AQ5JX71 171 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 CIAPIN1Q6FI81 312 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 NLRP10Q86W26 655 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 ZSCAN18Q8TBC5 510 aaPredicted RBP9.72□□□□□ -0.85
SMC5-203ENST00000475540 SEC14L1Q92503 715 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 ZFYVE21Q9BQ24 234 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 FBXL7Q9UJT9 491 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 CDK11AQ9UQ88 783 aaPredicted RBP9.72□□□□□ -0.85
SMC5-203ENST00000475540 SIT1Q9Y3P8 196 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 KCTD3Q9Y597 815 aa9.72□□□□□ -0.85
SMC5-203ENST00000475540 BLACEA4D250 179 aa9.71□□□□□ -0.86
SMC5-203ENST00000475540 RFXAPO00287 272 aa9.71□□□□□ -0.86
SMC5-203ENST00000475540 NCAM1P13591 858 aa9.71□□□□□ -0.86
SMC5-203ENST00000475540 SUMO1P63165 101 aaKnown RBP9.71□□□□□ -0.86
SMC5-203ENST00000475540 STYK1Q6J9G0 422 aa9.71□□□□□ -0.86
SMC5-203ENST00000475540 KCNT2Q6UVM3 1135 aa9.71□□□□□ -0.86
SMC5-203ENST00000475540 IGDCC3Q8IVU1 814 aa9.71□□□□□ -0.86
SMC5-203ENST00000475540 IFNL3Q8IZI9 196 aa9.71□□□□□ -0.86
SMC5-203ENST00000475540 DHRS4Q9BTZ2 278 aa9.71□□□□□ -0.86
SMC5-203ENST00000475540 MSCO60682 206 aa9.7□□□□□ -0.86
SMC5-203ENST00000475540 CFPP27918 469 aa9.7□□□□□ -0.86
SMC5-203ENST00000475540 SLC6A11P48066 632 aa9.7□□□□□ -0.86
SMC5-203ENST00000475540 BMS1Q14692 1282 aaKnown RBP9.7□□□□□ -0.86
SMC5-203ENST00000475540 FOXB2Q5VYV0 432 aa9.7□□□□□ -0.86
SMC5-203ENST00000475540 MRFAP1L1Q96HT8 127 aa9.7□□□□□ -0.86
SMC5-203ENST00000475540 RNF38Q9H0F5 515 aa9.7□□□□□ -0.86
SMC5-203ENST00000475540 ZSWIM4Q9H7M6 989 aa9.7□□□□□ -0.86
SMC5-203ENST00000475540 IRS4O14654 1257 aaPredicted RBP9.69□□□□□ -0.86
SMC5-203ENST00000475540 SGSM2O43147 1006 aa9.69□□□□□ -0.86
SMC5-203ENST00000475540 NUAK1O60285 661 aa9.69□□□□□ -0.86
SMC5-203ENST00000475540 DGKIO75912 1065 aa9.69□□□□□ -0.86
SMC5-203ENST00000475540 SSPNQ14714 243 aa9.69□□□□□ -0.86
SMC5-203ENST00000475540 CHRNA2Q15822 529 aa9.69□□□□□ -0.86
SMC5-203ENST00000475540 LBX2Q6XYB7 198 aa9.69□□□□□ -0.86
SMC5-203ENST00000475540 MILR1Q7Z6M3 343 aa9.69□□□□□ -0.86
SMC5-203ENST00000475540 LRRC56Q8IYG6 542 aaPredicted RBP9.69□□□□□ -0.86
SMC5-203ENST00000475540 BCAS3Q9H6U6 928 aa9.69□□□□□ -0.86
SMC5-203ENST00000475540 FAN1Q9Y2M0 1017 aa9.69□□□□□ -0.86
SMC5-203ENST00000475540 ASGR2P07307 311 aa9.68□□□□□ -0.86
SMC5-203ENST00000475540 GPR85P60893 370 aa9.68□□□□□ -0.86
SMC5-203ENST00000475540 KIZQ2M2Z5 673 aa9.68□□□□□ -0.86
SMC5-203ENST00000475540 CILP2Q8IUL8 1156 aa9.68□□□□□ -0.86
SMC5-203ENST00000475540 THAP3Q8WTV1 239 aaPredicted RBP9.68□□□□□ -0.86
SMC5-203ENST00000475540 PTPRN2Q92932 1015 aa9.68□□□□□ -0.86
SMC5-203ENST00000475540 LNPKQ9C0E8 428 aa9.68□□□□□ -0.86
SMC5-203ENST00000475540 IRF2BPLQ9H1B7 796 aa9.68□□□□□ -0.86
SMC5-203ENST00000475540 EPB41L1Q9H4G0 881 aa9.68□□□□□ -0.86
SMC5-203ENST00000475540 HGSO14964 777 aaPredicted RBP9.67□□□□□ -0.86
SMC5-203ENST00000475540 PI3P19957 117 aa9.67□□□□□ -0.86
SMC5-203ENST00000475540 FBLN1P23142 703 aa9.67□□□□□ -0.86
SMC5-203ENST00000475540 PMLP29590 882 aa9.67□□□□□ -0.86
SMC5-203ENST00000475540 CCDC144BQ3MJ40 725 aa9.67□□□□□ -0.86
SMC5-203ENST00000475540 CNKSR3Q6P9H4 555 aa9.67□□□□□ -0.86
SMC5-203ENST00000475540 MAMDC2Q7Z304 686 aaPredicted RBP9.67□□□□□ -0.86
SMC5-203ENST00000475540 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMC5-203ENST00000475540 EXOC2Q96KP1 924 aa9.67□□□□□ -0.86
SMC5-203ENST00000475540 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
SMC5-203ENST00000475540 AQP7O14520 342 aa9.66□□□□□ -0.86
SMC5-203ENST00000475540 JAG1P78504 1218 aa9.66□□□□□ -0.86
SMC5-203ENST00000475540 STEAP3Q658P3 488 aa9.66□□□□□ -0.86
SMC5-203ENST00000475540 TMEFF1Q8IYR6 380 aa9.66□□□□□ -0.86
SMC5-203ENST00000475540 JMYQ8N9B5 988 aa9.66□□□□□ -0.86
SMC5-203ENST00000475540 ZSWIM2Q8NEG5 633 aa9.66□□□□□ -0.86
SMC5-203ENST00000475540 JAM3Q9BX67 310 aa9.66□□□□□ -0.86
SMC5-203ENST00000475540 PALD1Q9ULE6 856 aa9.66□□□□□ -0.86
SMC5-203ENST00000475540 MRPS23Q9Y3D9 190 aaKnown RBP9.66□□□□□ -0.86
SMC5-203ENST00000475540 TRAF6Q9Y4K3 522 aa9.66□□□□□ -0.86
SMC5-203ENST00000475540 CCDC163A0A0D9SF12 145 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 ATF2P15336 505 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 IGFBP6P24592 240 aaPredicted RBP9.65□□□□□ -0.86
SMC5-203ENST00000475540 GABREP78334 506 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 FOXO4P98177 505 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 FZD5Q13467 585 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 AMIGO3Q86WK7 504 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 FAM129CQ86XR2 697 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 TMEM151BQ8IW70 566 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 NLGN1Q8N2Q7 840 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 LILRB2Q8N423 598 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 PANK1Q8TE04 598 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMC5-203ENST00000475540 CPA5Q8WXQ8 436 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 ALG1Q9BT22 464 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 CDIP1Q9H305 208 aa9.65□□□□□ -0.86
SMC5-203ENST00000475540 ASXL2Q76L83 1435 aa9.65□□□□□ -0.87
SMC5-203ENST00000475540 KRIT1O00522 736 aa9.64□□□□□ -0.87
SMC5-203ENST00000475540 MAFKO60675 156 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms