RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ITGA7Q13683 1181 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 PPP2R5BQ15173 497 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 SHHQ15465 462 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 C9orf50Q5SZB4 431 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 SPRYD3Q8NCJ5 442 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 BRF1Q92994 677 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 PXMP2Q9NR77 195 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 CFBP00751 764 aa18■□□□□ 0.47
CPSF3-203ENST00000475482 RAG1P15918 1043 aa18■□□□□ 0.47
CPSF3-203ENST00000475482 PURAQ00577 322 aaKnown RBP18■□□□□ 0.47
CPSF3-203ENST00000475482 TTLL4Q14679 1199 aa18■□□□□ 0.47
CPSF3-203ENST00000475482 VTI1AQ96AJ9 217 aa18■□□□□ 0.47
CPSF3-203ENST00000475482 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
CPSF3-203ENST00000475482 TCEANC2Q96MN5 208 aa18■□□□□ 0.47
CPSF3-203ENST00000475482 SPZ1Q9BXG8 430 aa18■□□□□ 0.47
CPSF3-203ENST00000475482 SLKQ9H2G2 1235 aaPredicted RBP18■□□□□ 0.47
CPSF3-203ENST00000475482 EIF3JO75822 258 aaKnown RBP17.99■□□□□ 0.47
CPSF3-203ENST00000475482 NR3C2P08235 984 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 TXNP10599 105 aaKnown RBP17.99■□□□□ 0.47
CPSF3-203ENST00000475482 CPT1AP50416 773 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 EPHB4P54760 987 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 STXBP2Q15833 593 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 SGMS1Q86VZ5 419 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 HOMER1Q86YM7 354 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 COPS5Q92905 334 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 LZTS2Q9BRK4 669 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 MYL10Q9BUA6 226 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 POLR3EQ9NVU0 708 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 CHMP5Q9NZZ3 219 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 TPCN1Q9ULQ1 816 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 MYH7BA7E2Y1 1941 aa17.99■□□□□ 0.47
CPSF3-203ENST00000475482 PDIA4P13667 645 aaKnown RBP17.98■□□□□ 0.47
CPSF3-203ENST00000475482 KIF5BP33176 963 aa17.98■□□□□ 0.47
CPSF3-203ENST00000475482 EVCP57679 992 aa17.98■□□□□ 0.47
CPSF3-203ENST00000475482 ARHGEF16Q5VV41 709 aa17.98■□□□□ 0.47
CPSF3-203ENST00000475482 MFSD5Q6N075 450 aa17.98■□□□□ 0.47
CPSF3-203ENST00000475482 SYNE3Q6ZMZ3 975 aa17.98■□□□□ 0.47
CPSF3-203ENST00000475482 VSIG10LQ86VR7 867 aa17.98■□□□□ 0.47
CPSF3-203ENST00000475482 OR6J1Q8NGC5 347 aa17.98■□□□□ 0.47
CPSF3-203ENST00000475482 CTCFLQ8NI51 663 aaPredicted RBP17.98■□□□□ 0.47
CPSF3-203ENST00000475482 PDCD2LQ9BRP1 358 aa17.98■□□□□ 0.47
CPSF3-203ENST00000475482 TLR3O15455 904 aaKnown RBP17.97■□□□□ 0.47
CPSF3-203ENST00000475482 KPNA6O60684 536 aa17.97■□□□□ 0.47
CPSF3-203ENST00000475482 RGS20O76081 388 aa17.97■□□□□ 0.47
CPSF3-203ENST00000475482 EIF2AK2P19525 551 aaKnown RBP17.97■□□□□ 0.47
CPSF3-203ENST00000475482 PSMC6P62333 389 aa17.97■□□□□ 0.47
CPSF3-203ENST00000475482 FPGSQ05932 587 aa17.97■□□□□ 0.47
CPSF3-203ENST00000475482 ME3Q16798 604 aa17.97■□□□□ 0.47
CPSF3-203ENST00000475482 FAM109BQ6ICB4 259 aaPredicted RBP17.97■□□□□ 0.47
CPSF3-203ENST00000475482 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
CPSF3-203ENST00000475482 DDX41Q9UJV9 622 aaKnown RBP17.97■□□□□ 0.47
CPSF3-203ENST00000475482 FRMPD4Q14CM0 1322 aa17.97■□□□□ 0.47
CPSF3-203ENST00000475482 GCOM1H8Y6P7 765 aaPredicted RBP17.96■□□□□ 0.47
CPSF3-203ENST00000475482 POLR2MP0CAP2 368 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 CALM1P0DP23 149 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 CALM2P0DP24 149 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 CALM3P0DP25 149 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 HOXA13P31271 388 aaPredicted RBP17.96■□□□□ 0.47
CPSF3-203ENST00000475482 GNAQP50148 359 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 ARHGAP1Q07960 439 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 BRDTQ58F21 947 aaPredicted RBP17.96■□□□□ 0.47
CPSF3-203ENST00000475482 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 SEPT14Q6ZU15 432 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 SRBD1Q8N5C6 995 aaKnown RBP17.96■□□□□ 0.47
CPSF3-203ENST00000475482 EMID1Q96A84 441 aaPredicted RBP17.96■□□□□ 0.47
CPSF3-203ENST00000475482 MTG1Q9BT17 334 aaPredicted RBP17.96■□□□□ 0.47
CPSF3-203ENST00000475482 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 SMC3Q9UQE7 1217 aa17.96■□□□□ 0.47
CPSF3-203ENST00000475482 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 B4GALT4O60513 344 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 PFKFB2O60825 505 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 PLEKHA8P1O95397 391 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 NUCB2P80303 420 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 APOBRQ0VD83 1088 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 PGM5Q15124 567 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 LY6KQ17RY6 165 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 C16orf59Q7L2K0 433 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 CCDC83Q8IWF9 413 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 GTF3C6Q969F1 213 aa17.95■□□□□ 0.46
CPSF3-203ENST00000475482 LARP6Q9BRS8 491 aaKnown RBP17.95■□□□□ 0.46
CPSF3-203ENST00000475482 LLPHQ9BRT6 129 aaKnown RBP17.95■□□□□ 0.46
CPSF3-203ENST00000475482 NAP1L2Q9ULW6 460 aaPredicted RBP17.95■□□□□ 0.46
CPSF3-203ENST00000475482 KLF18A0A0U1RQI7 1052 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 PIK3CDO00329 1044 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 GH1P01241 217 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 RCAN1P53805 252 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 FANCBQ8NB91 859 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 IL31RAQ8NI17 732 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 RRP36Q96EU6 259 aaKnown RBP17.94■□□□□ 0.46
CPSF3-203ENST00000475482 NOC4LQ9BVI4 516 aaKnown RBP17.94■□□□□ 0.46
CPSF3-203ENST00000475482 TRPV6Q9H1D0 765 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 KIF3AQ9Y496 699 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 SLC12A7Q9Y666 1083 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 COL6A3P12111 3177 aa17.94■□□□□ 0.46
CPSF3-203ENST00000475482 MMP3P08254 477 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 MYL3P08590 195 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 HOXD8P13378 290 aaPredicted RBP17.93■□□□□ 0.46
CPSF3-203ENST00000475482 RXRAP19793 462 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 PDIA3P30101 505 aaKnown RBP17.93■□□□□ 0.46
CPSF3-203ENST00000475482 DDIT3P35638 169 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms