RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ZNF341Q9BYN7 854 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 CNOT7Q9UIV1 285 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 PHF20L1A8MW92 1017 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 TBX3O15119 743 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 CFBP00751 764 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 ADKP55263 362 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 ECM1Q16610 540 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 UNC13DQ70J99 1090 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 PPFIBP1Q86W92 1011 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 TEPSINQ96N21 525 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 SGIP1Q9BQI5 828 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 VPS16Q9H269 839 aa17.19■□□□□ 0.34
RPUSD3-215ENST00000475470 BICDL2A1A5D9 508 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 PSDA5PKW4 1024 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 ZNF76P36508 570 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 COPB1P53618 953 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 HYIQ5T013 277 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 TEX2Q8IWB9 1127 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 ETNPPLQ8TBG4 499 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 P2RX5Q93086 422 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 SRRTQ9BXP5 876 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 THAP9Q9H5L6 903 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 TAB2Q9NYJ8 693 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 FAM86B1E9PN63 330 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 FAM86B2P0C5J1 330 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 POLR2MP0CAP2 368 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 CCNE1P24864 410 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 PBX1P40424 430 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 TTI2Q6NXR4 508 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 TC2NQ8N9U0 490 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 NOC3LQ8WTT2 800 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 DDX12PQ92771 950 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 BAG1Q99933 345 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 FBXO28Q9NVF7 368 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 MAGEC2Q9UBF1 373 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 KIAA1024Q9UPX6 916 aa17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 MRPL11Q9Y3B7 192 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-215ENST00000475470 FZD9O00144 591 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 SLC26A4O43511 780 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 IDEP14735 1019 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 CIITAP33076 1130 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 CEP135Q66GS9 1140 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 MYRIPQ8NFW9 859 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 HPS3Q969F9 1004 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 FAM20AQ96MK3 541 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 SLC39A2Q9NP94 309 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 HACL1Q9UJ83 578 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 AKR1B15C9JRZ8 316 aaPredicted RBP17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 CYP3A4P08684 503 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 EEF1GP26641 437 aaKnown RBP17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 STAT3P40763 770 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 COBLL1Q53SF7 1204 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 HAUS3Q68CZ6 603 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 NYAP1Q6ZVC0 841 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 CSGALNACT2Q8N6G5 542 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 LENG9Q96B70 501 aa17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 BMP2KQ9NSY1 1161 aaPredicted RBP17.17■□□□□ 0.34
RPUSD3-215ENST00000475470 SMCHD1A6NHR9 2005 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 ARHGAP6O43182 974 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 CCP110O43303 1012 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 ASTN2O75129 1339 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 SSBP05455 408 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 IRF2BP1Q8IU81 584 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 KIAA0895Q8NCT3 520 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 ERMNQ8TAM6 284 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 TBC1D5Q92609 795 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 DEFB129Q9H1M3 183 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 ATAD5Q96QE3 1844 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 STX10O60499 249 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 RBL2Q08999 1139 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 KIF4BQ2VIQ3 1234 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 ANKRD40Q6AI12 368 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 TMEM139Q8IV31 216 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 CPLX3Q8WVH0 158 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 ZNF592Q92610 1267 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 PPP1R13BQ96KQ4 1090 aa17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 DUSP9Q99956 384 aaKnown RBP17.16■□□□□ 0.34
RPUSD3-215ENST00000475470 ABCB11O95342 1321 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 ITIH6Q6UXX5 1313 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 POTEB3A0JP26 581 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 POTECB2RU33 542 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 E9PMD0 336 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 CTNND1O60716 968 aaKnown RBP17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 TPM1P09493 284 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 PRELPP51888 382 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 POTEBQ6S5H4 581 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 LDHDQ86WU2 507 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 PAXBP1Q9Y5B6 917 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 MSH4O15457 936 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 INPP5BP32019 993 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 PTGER2P43116 358 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 SPIRE1Q08AE8 756 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 PSMD2Q13200 908 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 CYP2W1Q8TAV3 490 aa17.15■□□□□ 0.34
RPUSD3-215ENST00000475470 EHMT1Q9H9B1 1298 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms